RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 REV3LO60673 3130 aa11.55□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ABCA4P78363 2273 aa11.55□□□□□ -0.56
TNFRSF11A-205ENST00000616710 C2orf16Q68DN1 1984 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 C2CD4DB7Z1M9 353 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 CELA3AP09093 270 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 RBPJQ06330 500 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 Q8IYB0 196 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 MRPS17Q9Y2R5 130 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SPTBN5Q9NRC6 3674 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 CCL4P13236 92 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ZNF497Q6ZNH5 498 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SF3B5Q9BWJ5 86 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 COL6A3P12111 3177 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 MAGEA5P43359 124 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 LYZP61626 148 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ZNRF1Q8ND25 227 aa11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
TNFRSF11A-205ENST00000616710 PEX7O00628 323 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SLC25A17O43808 307 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 GFRA3O60609 400 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 AGFG2O95081 481 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 RBP4P02753 201 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 C2orf70A6NJV1 201 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SPRY3O43610 288 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 RAB1CQ92928 201 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 BDP1A6H8Y1 2624 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 C22orf46C9J442 243 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 AREGP15514 252 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 PEAR1Q5VY43 1037 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 GRAMD2BQ96HH9 432 aa11.53□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.56
TNFRSF11A-205ENST00000616710 ZNF716A6NP11 495 aa11.52□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SLC25A53Q5H9E4 307 aa11.52□□□□□ -0.56
TNFRSF11A-205ENST00000616710 HCP5Q6MZN7 132 aa11.52□□□□□ -0.56
TNFRSF11A-205ENST00000616710 KLF13Q9Y2Y9 288 aaPredicted RBP11.52□□□□□ -0.56
TNFRSF11A-205ENST00000616710 SUB1P53999 127 aaKnown RBP eCLIP11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 GDF5OSQ5U4N7 250 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 PET117Q6UWS5 81 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 COL25A1Q9BXS0 654 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ACP1P24666 158 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 C5orf30Q96GV9 206 aa11.52□□□□□ -0.57
TNFRSF11A-205ENST00000616710 SPAARA0A1B0GVQ0 90 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 SEC11AP67812 179 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 RHOGP84095 191 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 SLC25A45Q8N413 288 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 IGHV1OR15-9A0A0B4J2B8 117 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 HSPE1P61604 102 aaKnown RBP11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 Q6ZR03 302 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ARPC1AQ92747 370 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 G3V4G9 280 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ATP6V0BQ99437 205 aa11.51□□□□□ -0.57
TNFRSF11A-205ENST00000616710 KBTBD11-OT1A0A1B0GTJ5 212 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 FOXL2NBQ6ZUU3 175 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 CNIH1O95406 144 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 RIGQ13278 110 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 MORN5Q5VZ52 161 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ZNF414Q96IQ9 312 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 LOXL2Q9Y4K0 774 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 HCFC1P51610 2035 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 GAGE12HA6NDE8 117 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 SRFP11831 508 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 FOXE3Q13461 319 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
TNFRSF11A-205ENST00000616710 H3BMG7 143 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 H7C2G1 150 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 K7EP34 96 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 Q6P435 159 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 Q6ZS49 121 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 TMEM164Q5U3C3 297 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 C1RLQ9NZP8 487 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
TNFRSF11A-205ENST00000616710 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms