RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 CCL3P10147 92 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 ATP5L2Q7Z4Y8 100 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 PRNDQ9UKY0 176 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 NDUFA3O95167 84 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 A8MWV9 139 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 TMEM262E9PQX1 116 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 VEGFBP49765 207 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 C2orf83Q53S99 150 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 PCP2Q8IVA1 136 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 Q8N976 141 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 OR9G1Q8NH87 305 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 BOKQ9UMX3 212 aaPredicted RBP11.21□□□□□ -0.62
PPP4R3B-205ENST00000616288 PPP1R32Q7Z5V6 425 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 ARFGEF3Q5TH69 2177 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 COQ2Q96H96 371 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE7O76087 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 MOSP00540 346 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 SP9P0CG40 484 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAGE4Q13068 117 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 DCTN5Q9BTE1 182 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 UBE2ZQ9H832 354 aaPredicted RBP11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 ZNF256Q9Y2P7 627 aaPredicted RBP11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 TSPAN13O95857 204 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 ACP1P24666 158 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 ORMDL3Q8N138 153 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 FGFBP3Q8TAT2 258 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
PPP4R3B-205ENST00000616288 FOLR3P41439 243 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 LRRC29Q8WV35 223 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 LILRA5A6NI73 299 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 M0R3E3 92 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 KIR2DS2P43631 304 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 PKIBQ9C010 78 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 SLC25A10Q9UBX3 287 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 TFF1P04155 84 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 C1RLQ9NZP8 487 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 VCX2Q9H322 139 aa11.18□□□□□ -0.62
PPP4R3B-205ENST00000616288 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 WNT9BO14905 357 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 GGTLC3B5MD39 225 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 LEPP41159 167 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 TMEM54Q969K7 222 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 PLA2G2FQ9BZM2 168 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 POLEQ07864 2286 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 PCDH15Q96QU1 1955 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 D6R8Y8 96 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 HCP5Q6MZN7 132 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
PPP4R3B-205ENST00000616288 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 NCR2O95944 276 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 REG1BP48304 166 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 FAM53AQ6NSI3 398 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 CXCL10P02778 98 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 CFIP05156 583 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 CELA2AP08217 269 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 IGKCP01834 107 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 CYB561P49447 251 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 TMPRSS3P57727 454 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 MZT1Q08AG7 82 aa11.16□□□□□ -0.62
PPP4R3B-205ENST00000616288 RPRMLQ8N4K4 120 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms