RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PPT1P50897 306 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 B2MP61769 119 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 NSUN5P1Q3KNT7 163 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 ETFRF1Q6IPR1 90 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 SPSB3Q6PJ21 355 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 TMEM144Q7Z5S9 345 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 OR2T6Q8NHC8 308 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 MBD3L1Q8WWY6 194 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
COL4A1-205ENST00000615732 CACNG8Q8WXS5 425 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 P2RX4Q99571 388 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 SRSF8Q9BRL6 282 aaKnown RBP8.47□□□□□ -1.05
COL4A1-205ENST00000615732 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 A0A1W2PPV4 95 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 RBFOX3A6NFN3 312 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 E7EUB6 86 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 CORTO00230 105 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 CD5P06127 495 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 CD24P25063 80 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 FGF8P55075 233 aaPredicted RBP8.46□□□□□ -1.06
COL4A1-205ENST00000615732 HAGHQ16775 308 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 C5orf64Q2M2E5 130 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 MIC13Q5XKP0 118 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 TMEM219Q86XT9 240 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 IQCF2Q8IXL9 164 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 DYNAPQ8N1N2 210 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 ACY3Q96HD9 319 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 GNG13Q9P2W3 67 aa8.46□□□□□ -1.06
COL4A1-205ENST00000615732 PLXNB1O43157 2135 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 DNAH9Q9NYC9 4486 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 APELAP0DMC3 54 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 AREGP15514 252 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 CCL20P78556 96 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 EBI3Q14213 229 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 FXYD3Q14802 87 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 ZNF506Q5JVG8 444 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 SVBPQ8N300 66 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 STPG3Q8N7X2 389 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 SEC11CQ9BY50 192 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 SMDT1Q9H4I9 107 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 ZNF702PQ9H963 129 aa8.45□□□□□ -1.06
COL4A1-205ENST00000615732 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
COL4A1-205ENST00000615732 LOC102723971A0A1B0GUV8 181 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 ZFP92A6NM28 416 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 TEX22C9J3V5 150 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 FCN1O00602 326 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 MT-CO2P00403 227 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 CD28P10747 220 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 DEFA4P12838 97 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 OR10J1P30954 320 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 RPL29P47914 159 aaKnown RBP8.44□□□□□ -1.06
COL4A1-205ENST00000615732 GAMTQ14353 236 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 TMEM95Q3KNT9 176 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 SSX7Q7RTT5 188 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 REC114Q7Z4M0 266 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 RPP25LQ8N5L8 163 aaKnown RBP8.44□□□□□ -1.06
COL4A1-205ENST00000615732 Q8N6K4 173 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 OR1L6Q8NGR2 347 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 PIFOQ8TCI5 191 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 RXFP4Q8TDU9 374 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 ARPC1AQ92747 370 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 RASL11BQ9BPW5 248 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 SLC35B3Q9H1N7 401 aa8.44□□□□□ -1.06
COL4A1-205ENST00000615732 CARHSP1Q9Y2V2 147 aaKnown RBP8.44□□□□□ -1.06
COL4A1-205ENST00000615732 F11RQ9Y624 299 aaKnown RBP8.44□□□□□ -1.06
COL4A1-205ENST00000615732 SEC14L6B5MCN3 397 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 HMGB3O15347 200 aaKnown RBP8.43□□□□□ -1.06
COL4A1-205ENST00000615732 SCO1O75880 301 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 YIF1AO95070 293 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 HSPB1P04792 205 aaKnown RBP8.43□□□□□ -1.06
COL4A1-205ENST00000615732 BCL2P10415 239 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 ADCYAP1P18509 176 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 TAGLN2P37802 199 aaKnown RBP8.43□□□□□ -1.06
COL4A1-205ENST00000615732 RHOBP62745 196 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 ICAM4Q14773 271 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 KHDC3LQ587J8 217 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 CYP2G1PQ6ZSU1 146 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 RARRES2Q99969 163 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 SLC45A2Q9UMX9 530 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 NOTCH3Q9UM47 2321 aa8.43□□□□□ -1.06
COL4A1-205ENST00000615732 A0A1W2PRX2 142 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 C9JQL5 133 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 EIF3GO75821 320 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL4A1-205ENST00000615732 SNAPINO95295 136 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 PSMB3P49720 205 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 RND2P52198 227 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 CEBPGP53567 150 aa8.42□□□□□ -1.06
COL4A1-205ENST00000615732 MLANAQ16655 118 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms