RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
GGA3-220ENST00000613421 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
GGA3-220ENST00000613421 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
GGA3-220ENST00000613421 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
GGA3-220ENST00000613421 C7orf71A4D174 169 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 C15orf62A8K5M9 175 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 FAM168AQ92567 244 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 KLK15Q9H2R5 256 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 CIDEAO60543 219 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 GCSHP23434 173 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 TSPOP30536 169 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 Q6ZS92 163 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 HIST3H2BBQ8N257 126 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 AGMATQ9BSE5 352 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 ZNF474Q6S9Z5 364 aaPredicted RBP11.33□□□□□ -0.6
GGA3-220ENST00000613421 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
GGA3-220ENST00000613421 GNB1LQ9BYB4 327 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 A0A0G2JNJ9 132 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
GGA3-220ENST00000613421 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
GGA3-220ENST00000613421 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
GGA3-220ENST00000613421 Q9UFV3 132 aa11.33□□□□□ -0.6
GGA3-220ENST00000613421 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 A6NJY4 79 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 PRSS8Q16651 343 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
GGA3-220ENST00000613421 FAM159AQ6UWV7 190 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 TMEM167AQ8TBQ9 72 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 LIME1Q9H400 295 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 NTF4P34130 210 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 C8orf46Q8TAG6 207 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 TEX29Q8N6K0 151 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
GGA3-220ENST00000613421 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 K7ERU9 68 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 SPSB3Q6PJ21 355 aa11.32□□□□□ -0.6
GGA3-220ENST00000613421 C9JCJ5 164 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 H0YJW9 148 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 FABP2P12104 132 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 FOXL1Q12952 345 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 DDB2Q92466 427 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 F11RQ9Y624 299 aaKnown RBP11.31□□□□□ -0.6
GGA3-220ENST00000613421 POLEQ07864 2286 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
GGA3-220ENST00000613421 IGLV3-1P01715 115 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 MYOD1P15172 320 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
GGA3-220ENST00000613421 MYO7BQ6PIF6 2116 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 WIPF3A6NGB9 483 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 FAM74A4Q5TZK3 123 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 KIAA1671Q9BY89 1806 aa11.31□□□□□ -0.6
GGA3-220ENST00000613421 C9JQL5 133 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 M0R381 172 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 HIST1H4GQ99525 98 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
GGA3-220ENST00000613421 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
GGA3-220ENST00000613421 LMO1P25800 156 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 ASIPP42127 132 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 SMAGPQ0VAQ4 97 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 ZNF56Q15929 161 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 ZNF124Q15973 351 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
GGA3-220ENST00000613421 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 CENPVQ7Z7K6 275 aaPredicted RBP11.29□□□□□ -0.6
GGA3-220ENST00000613421 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 AREGP15514 252 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 AMBPP02760 352 aa11.29□□□□□ -0.6
GGA3-220ENST00000613421 CACNA1GO43497 2377 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 A1L4Q6 167 aa11.28□□□□□ -0.6
GGA3-220ENST00000613421 RHOGP84095 191 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms