RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 hADV38S2A0JD32 116 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 PDLIM3Q53GG5 364 aaPredicted RBP13.39□□□□□ -0.27
CNOT3-208ENST00000613073 DDB2Q92466 427 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 FOXH1O75593 365 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 ZNF439Q8NDP4 499 aa13.39□□□□□ -0.27
CNOT3-208ENST00000613073 CDSNQ15517 529 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 NUDT11Q96G61 164 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
CNOT3-208ENST00000613073 ITPR1Q14643 2758 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 TMEM238C9JI98 176 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 CD3EP07766 207 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 CA7P43166 264 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 TNXAQ16473 311 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 OR4S2Q8NH73 311 aa13.38□□□□□ -0.27
CNOT3-208ENST00000613073 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
CNOT3-208ENST00000613073 TNCP24821 2201 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 KLRB1Q12918 225 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 OR10J3Q5JRS4 329 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 PQLC2Q6ZP29 291 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 CORO2AQ92828 525 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 SPTBN1Q01082 2364 aaKnown RBP13.37□□□□□ -0.27
CNOT3-208ENST00000613073 TRAV9-2A0A087WT02 112 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 HSBP1O75506 76 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 NUDT3O95989 172 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 MYOD1P15172 320 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 CENPWQ5EE01 88 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 TMEM200BQ69YZ2 307 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 MUC15Q8N387 334 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 SEPSECSQ9HD40 501 aaKnown RBP13.37□□□□□ -0.27
CNOT3-208ENST00000613073 HEYLQ9NQ87 328 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-208ENST00000613073 CDC42EP3Q9UKI2 254 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 WDR83OSQ9Y284 106 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 LYNX1G3V0Z9 82 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 STAG3L2P0CL84 134 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 STAG3L3P0CL85 134 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 LYNX1P0DP58 116 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 SPATA12Q7Z6I5 190 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
CNOT3-208ENST00000613073 M0R2Z0 102 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 TAX1BP3O14907 124 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 ACTL6BO94805 426 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 MGST1P10620 155 aaKnown RBP13.36□□□□□ -0.27
CNOT3-208ENST00000613073 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-208ENST00000613073 SLAQ13239 276 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 PRR27Q6MZM9 219 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 ABHD12Q8N2K0 398 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 FAM216AQ8WUB2 273 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 MS4A5Q9H3V2 200 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 CTSZQ9UBR2 303 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 CXorf1O96002 111 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 IGKV1-16P04430 117 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 CRYBB3P26998 211 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 CX3CL1P78423 397 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 RNASEKQ6P5S7 137 aaKnown RBP13.36□□□□□ -0.27
CNOT3-208ENST00000613073 SLC25A48Q6ZT89 311 aaKnown RBP13.36□□□□□ -0.27
CNOT3-208ENST00000613073 ZNF714Q96N38 554 aa13.36□□□□□ -0.27
CNOT3-208ENST00000613073 SSBP3Q9BWW4 388 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-208ENST00000613073 TRAV9-1A0A075B6T8 112 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 MUC21A0A0G2JKD1 596 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 MUC21A0A140T8X8 626 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 SAP30O75446 220 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 GCHFRP30047 84 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 REG1BP48304 166 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 GNG4P50150 75 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 PMCHL1Q16048 86 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 MUC21Q5SSG8 566 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 MGST2Q99735 147 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 HINT2Q9BX68 163 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 MEGF9Q9H1U4 602 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 LINC00574Q9H8X3 128 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 TRBV9A0A0B4J1U6 114 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 NDUFB3O43676 98 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 APCSP02743 223 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 CT45A6P0DMU7 189 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 CT45A5P0DMU8 189 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 CT45A7P0DMV0 189 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-208ENST00000613073 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-208ENST00000613073 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 ARL2-SNX15V9GYD0 113 aa13.35□□□□□ -0.27
CNOT3-208ENST00000613073 HRNRQ86YZ3 2850 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-208ENST00000613073 FAM181BA6NEQ2 426 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 SH2D7A6NKC9 451 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-208ENST00000613073 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 OR5B3Q8NH48 314 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 RAB1CQ92928 201 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms