RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 LRTM2Q8N967 370 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 RBKSQ9H477 322 aa9.26□□□□□ -0.93
CBWD3-208ENST00000612050 PAIP2BQ9ULR5 123 aaKnown RBP9.26□□□□□ -0.93
CBWD3-208ENST00000612050 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 CHEK1O14757 476 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 IL7P13232 177 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 RND2P52198 227 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 BAK1Q16611 211 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 SLC35E1Q96K37 410 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 GGTLC1Q9BX51 225 aa9.25□□□□□ -0.93
CBWD3-208ENST00000612050 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 HOXB5P09067 269 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 OR10J1P30954 320 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
CBWD3-208ENST00000612050 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 TCF24Q7RTU0 167 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 S100ZQ8WXG8 99 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 RNF2Q99496 336 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
CBWD3-208ENST00000612050 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
CBWD3-208ENST00000612050 IGKV3-7A0A075B6H7 116 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 TFPI2P48307 235 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 YPEL3P61236 119 aaPredicted RBP9.23□□□□□ -0.93
CBWD3-208ENST00000612050 PRSS54Q6PEW0 395 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 CCDC32Q9BV29 185 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 WFDC10AQ9H1F0 79 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 UBQLN2Q9UHD9 624 aa9.23□□□□□ -0.93
CBWD3-208ENST00000612050 C9orf170A2RU37 121 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 ZFP92A6NM28 416 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 SYNGR2O43760 224 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 OR4E1P0C645 316 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 S100A7P31151 101 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 GPX4P36969 197 aaPredicted RBP9.22□□□□□ -0.93
CBWD3-208ENST00000612050 AP2S1P53680 142 aaPredicted RBP9.22□□□□□ -0.93
CBWD3-208ENST00000612050 TIGITQ495A1 244 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 NPIPB3Q92617 1050 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 HELTA6NFD8 242 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 J3QL48 77 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 UBE2CO00762 179 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 LYRM1O43325 122 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 HNRNPCP07910 306 aaKnown RBP eCLIP9.22□□□□□ -0.93
CBWD3-208ENST00000612050 IGLC1P0CG04 106 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 RD3LP0DJH9 198 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 IAPPP10997 89 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 LYL1P12980 280 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 DHRS2Q13268 280 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 MLANAQ16655 118 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 GGNBP1Q5YKI7 109 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 STPG3Q8N7X2 389 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 RABAC1Q9UI14 185 aa9.22□□□□□ -0.93
CBWD3-208ENST00000612050 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
CBWD3-208ENST00000612050 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
CBWD3-208ENST00000612050 PITX3O75364 302 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 DFFBO76075 338 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 TOMM40O96008 361 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 IL4P05112 153 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
CBWD3-208ENST00000612050 ZNF846Q147U1 533 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.94
CBWD3-208ENST00000612050 WFDC3Q8IUB2 231 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 GBGT1Q8N5D6 347 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 OR51G1Q8NGK1 321 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 C20orf85Q9H1P6 137 aa9.21□□□□□ -0.94
CBWD3-208ENST00000612050 STRAPQ9Y3F4 350 aaKnown RBP9.21□□□□□ -0.94
CBWD3-208ENST00000612050 IGHV3-66A0A0C4DH42 116 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 KIR2DL5BA0A0G2JN68 375 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 KIR2DL5BA0A0G2JPC4 375 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 CFDP00746 253 aaPredicted RBP9.2□□□□□ -0.94
CBWD3-208ENST00000612050 IGKV1-17P01599 117 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
CBWD3-208ENST00000612050 CRYBB3P26998 211 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 NKX2-1P43699 371 aaPredicted RBP9.2□□□□□ -0.94
CBWD3-208ENST00000612050 P2RY1P47900 373 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 SPANXN5Q5MJ07 72 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 KIR2DL5AQ8N109 375 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 STXBP6Q8NFX7 210 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 PPP1R14BQ96C90 147 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 WDR12Q9GZL7 423 aaKnown RBP9.2□□□□□ -0.94
CBWD3-208ENST00000612050 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
CBWD3-208ENST00000612050 FLVCR2Q9UPI3 526 aa9.2□□□□□ -0.94
CBWD3-208ENST00000612050 FAM240BA0A1B0GVZ2 78 aa9.19□□□□□ -0.94
CBWD3-208ENST00000612050 SNRPGP15A8MWD9 76 aa9.19□□□□□ -0.94
CBWD3-208ENST00000612050 SCGB1D2O95969 90 aa9.19□□□□□ -0.94
CBWD3-208ENST00000612050 SDHCQ99643 169 aaPredicted RBP9.19□□□□□ -0.94
CBWD3-208ENST00000612050 PBDC1Q9BVG4 233 aa9.19□□□□□ -0.94
CBWD3-208ENST00000612050 MAGT1Q9H0U3 335 aa9.19□□□□□ -0.94
CBWD3-208ENST00000612050 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms