RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PRCDQ00LT1 54 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 SPACA3Q8IXA5 215 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 PGLYRP4Q96LB8 373 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 RNF7Q9UBF6 113 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 RNF24Q9Y225 148 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 ARL2-SNX15V9GYD0 113 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 A0A1B0GWJ7 208 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 ZNF891A8MT65 544 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-216ENST00000610401 IGLC2P0DOY2 106 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 IGLC3P0DOY3 106 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 WDR73Q6P4I2 378 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 SEM1Q6ZVN7 128 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 OR10X1Q8NGY0 326 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 PPOXP50336 477 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 UBE2G1P62253 170 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 MBNL2Q5VZF2 373 aaKnown RBP16.55■□□□□ 0.24
SSBP3-216ENST00000610401 C10orf113Q5VZT2 155 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 EBLN2Q6P2I7 272 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 DEFB124Q8NES8 71 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 ZNF835Q9Y2P0 537 aa16.55■□□□□ 0.24
SSBP3-216ENST00000610401 TLN1Q9Y490 2541 aaKnown RBP16.55■□□□□ 0.24
SSBP3-216ENST00000610401 PGPA6NDG6 321 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 RPL19P84098 196 aaKnown RBP16.54■□□□□ 0.24
SSBP3-216ENST00000610401 TMEM249Q2WGJ8 235 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 LINC00305Q7Z4B0 112 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 ZC2HC1AQ96GY0 325 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
SSBP3-216ENST00000610401 SP9P0CG40 484 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 CORO2AQ92828 525 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 PCP4P48539 62 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 WT1-ASQ06250 92 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 RNF151Q2KHN1 245 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 SPATA12Q7Z6I5 190 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 OSTCQ9NRP0 149 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 UQCR10Q9UDW1 63 aa16.54■□□□□ 0.24
SSBP3-216ENST00000610401 LOC102724200A0A096LPH7 203 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-216ENST00000610401 VWC2LB2RUY7 222 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 NDUFB8O95169 186 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 ERHP84090 104 aaKnown RBP16.53■□□□□ 0.24
SSBP3-216ENST00000610401 CD69Q07108 199 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 FLYWCH2Q96CP2 140 aaKnown RBP16.53■□□□□ 0.24
SSBP3-216ENST00000610401 GAFA1Q96PS6 74 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 IGHV1-46P01743 117 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 KIR2DS2P43631 304 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 WFDC8Q8IUA0 241 aa16.53■□□□□ 0.24
SSBP3-216ENST00000610401 IGLV1-44P01699 117 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 HLA-DQA1P01909 254 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 PATE2Q6UY27 113 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 S4R3C0 116 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 hDV102S1A0JD36 115 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 PRRX1P54821 245 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 LINC00322Q6ZN03 302 aaPredicted RBP16.52■□□□□ 0.24
SSBP3-216ENST00000610401 ZNF841Q6ZN19 808 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 FAM167A-AS1Q96KT0 104 aa16.52■□□□□ 0.24
SSBP3-216ENST00000610401 ARHGAP32A7KAX9 2087 aa16.52■□□□□ 0.23
SSBP3-216ENST00000610401 MUC21A0A0G2JKD1 596 aa16.52■□□□□ 0.23
SSBP3-216ENST00000610401 MUC21A0A140T8X8 626 aa16.52■□□□□ 0.23
SSBP3-216ENST00000610401 MUC21Q5SSG8 566 aa16.52■□□□□ 0.23
SSBP3-216ENST00000610401 PLSCR4Q9NRQ2 329 aa16.52■□□□□ 0.23
SSBP3-216ENST00000610401 C20orf202A1L168 122 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 PEX7O00628 323 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 AARDQ4LEZ3 155 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 IZUMO1RA6ND01 250 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 FAM90A9PA6NNJ1 464 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 FAM87AP0C7U9 286 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 SELENOVP59797 346 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 TBR1Q16650 682 aa16.51■□□□□ 0.23
SSBP3-216ENST00000610401 IGLL1P15814 213 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 MZT1Q08AG7 82 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 MT-ND6P03923 174 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 SLC25A10Q9UBX3 287 aaPredicted RBP16.5■□□□□ 0.23
SSBP3-216ENST00000610401 TRAV17A0A0B4J275 112 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 SMIM27A0A1W2PRY6 76 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 CCL25O15444 150 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 APOA2P02652 100 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 CGB3P0DN86 165 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 CGB7P0DN87 165 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 CNTFRP26992 372 aa16.5■□□□□ 0.23
SSBP3-216ENST00000610401 FAM181BA6NEQ2 426 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 CTRLP40313 264 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 ZNF430Q9H8G1 570 aaPredicted RBP16.49■□□□□ 0.23
SSBP3-216ENST00000610401 TNFRSF19Q9NS68 423 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 ESDP10768 282 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 TSPOP30536 169 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 OR10J3Q5JRS4 329 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 LYPD2Q6UXB3 125 aa16.49■□□□□ 0.23
SSBP3-216ENST00000610401 IGHG3P01860 377 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 RPUSD1Q9UJJ7 312 aaKnown RBP16.48■□□□□ 0.23
SSBP3-216ENST00000610401 ZFP30Q9Y2G7 519 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 BSNQ9UPA5 3926 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 K7EM74 188 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 BTF3P20290 206 aaKnown RBP16.48■□□□□ 0.23
SSBP3-216ENST00000610401 GUSBP1Q15486 140 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 SSX8Q7RTT4 187 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 ZNF329Q86UD4 541 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 OR1L8Q8NGR8 309 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 TRBV9A0A0B4J1U6 114 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 PDPNQ86YL7 162 aa16.48■□□□□ 0.23
SSBP3-216ENST00000610401 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms