RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 HSBP1L1C9JCN9 74 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 TCL1AP56279 114 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 RPL8P62917 257 aaKnown RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 MRPL20Q9BYC9 149 aaKnown RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 SERTAD4Q9NUC0 356 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 H0YJW9 148 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 OR4A5Q8NH83 315 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
CTCFL-219ENST00000608720 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
CTCFL-219ENST00000608720 CBY3A6NI87 242 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 PMCHP20382 165 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 CD40P25942 277 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 SLC35B1P78383 322 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 VAMP3Q15836 100 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 RPRMLQ8N4K4 120 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 DEFB124Q8NES8 71 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 TSKUQ8WUA8 353 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
CTCFL-219ENST00000608720 RCHY1Q96PM5 261 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 INTS1Q8N201 2190 aaKnown RBP11.87□□□□□ -0.51
CTCFL-219ENST00000608720 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 SPAARA0A1B0GVQ0 90 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 K7ERU9 68 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 BMPR1BO00238 502 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 TOX4O94842 621 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 TMEM11P17152 192 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 MRPL54Q6P161 138 aaKnown RBP11.87□□□□□ -0.51
CTCFL-219ENST00000608720 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 Q6ZVH6 145 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
CTCFL-219ENST00000608720 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-219ENST00000608720 M0QZ24 198 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 APCSP02743 223 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 TNFRSF1AP19438 455 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTCFL-219ENST00000608720 TBR1Q16650 682 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 LDLRAD2Q5SZI1 272 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 IGFL3Q6UXB1 125 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 FAM231DQ6ZW35 169 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 SVIPQ8NHG7 77 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 VSTM2AQ8TAG5 236 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-219ENST00000608720 AMMECR1Q9Y4X0 333 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-219ENST00000608720 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 SRIP30626 198 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 MORN5Q5VZ52 161 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-219ENST00000608720 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 CLEC7AQ9BXN2 247 aa11.86□□□□□ -0.51
CTCFL-219ENST00000608720 ARF6P62330 175 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 ZNF355PQ9NSJ1 428 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 DSCAMO60469 2012 aa11.85□□□□□ -0.51
CTCFL-219ENST00000608720 FAM71F2Q6NXP2 309 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 ZNF329Q86UD4 541 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 OR8B3Q8NGG8 313 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 CHRDL1Q9BU40 450 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 C1RLQ9NZP8 487 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 CEP295Q9C0D2 2601 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 TCRBV4S1A1TA0A5B7 111 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 TAX1BP3O14907 124 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 CCL8P80075 99 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 C22orf34Q6ZV56 151 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 NPIPB3Q92617 1050 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 MBD6Q96DN6 1003 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
CTCFL-219ENST00000608720 E7EUB6 86 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 PEX7O00628 323 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 IGLL1P15814 213 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 PATE2Q6UY27 113 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 DEFB125Q8N687 156 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 THAP8Q8NA92 274 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 NHLRC2Q8NBF2 726 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 LINC00479Q96M42 142 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-219ENST00000608720 ST20Q9HBF5 79 aa11.83□□□□□ -0.52
CTCFL-219ENST00000608720 CA1P00915 261 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-219ENST00000608720 PYYP10082 97 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms