RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 BPIFCQ8NFQ6 507 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FAM103A1Q9BTL3 118 aaKnown RBP9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TNFRSF19Q9NS68 423 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FUT9Q9Y231 359 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CARHSP1Q9Y2V2 147 aaKnown RBP9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CSMD2Q7Z408 3487 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FAM223BA6NKX1 122 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 AP4M1O00189 453 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 BCL2P10415 239 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MLANAQ16655 118 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FAM209BQ5JX69 171 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SLC35E3Q7Z769 313 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FAM223AQ8IWN6 122 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SLC25A22Q9H936 323 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RNF24Q9Y225 148 aa9.65□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 LOC102723971A0A1B0GUV8 181 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 APELAP0DMC3 54 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 HNF1AP20823 631 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 S100A7P31151 101 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 LCN15Q6UWW0 184 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SSX7Q7RTT5 188 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 EIF5A2Q9GZV4 153 aaKnown RBP9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SLC35B3Q9H1N7 401 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 DNAJC4Q9NNZ3 241 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TECRQ9NZ01 308 aaKnown RBP9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 VPS13CQ709C8 3753 aa9.64□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TOMM40O96008 361 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 CCL20P78556 96 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TMEM167BQ9NRX6 74 aa9.63□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 OR2C1O95371 312 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 C8orf88P0DMB2 117 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 PPIFP30405 207 aaKnown RBP9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ICAM4Q14773 271 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 LY6EQ16553 131 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ECSCRQ19T08 205 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 GCSAMLQ5JQS6 135 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 FAM78BQ5VT40 261 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SPNS3Q6ZMD2 512 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 C19orf35Q6ZS72 473 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 BCL6BQ8N143 479 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 NARS2Q96I59 477 aaKnown RBP9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 USMG5Q96IX5 58 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 LINC00052Q96N35 136 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 FASNP49327 2511 aaKnown RBP9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 MDFIC2A0A1B0GVS7 189 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 F8W735 103 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TMEM250H0YL14 139 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 GNG7O60262 68 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 HYPMO75409 117 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SFTA3P0C7M3 94 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ZNF90Q03938 601 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 CCDC28AQ8IWP9 274 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SVBPQ8N300 66 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 OR5T1Q8NG75 326 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TMEM37Q8WXS4 190 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 EEF1AKMT3Q96AZ1 226 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 NPFFR1Q9GZQ6 430 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SEPSECSQ9HD40 501 aaKnown RBP9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 GNG13Q9P2W3 67 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 NBPF19A0A087WUL8 3843 aa9.61□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 FLNAP21333 2647 aaKnown RBP9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 NDUFB8O95169 186 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 IGLV1-40P01703 118 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 ARL14EPLP0DKL9 152 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 GCHFRP30047 84 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 FGF8P55075 233 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 RHOGP84095 191 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 SRSF3P84103 164 aaKnown RBP9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 CFHR3Q02985 330 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 C15orf32Q32M92 178 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 Q8N2B8 174 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 TCEAL7Q9BRU2 100 aa9.6□□□□□ -0.87
NEDD8-MDP1-203ENST00000604306 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms