RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
FOCAD-213ENST00000604254 IGKV3-7A0A075B6H7 116 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 TRAV14DV4A0A0A6YYC5 116 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 A0A1B0GU03 582 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 LINC00854A0A1B0GVQ3 168 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 NAP1L6A6NFF2 107 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 CENPXA8MT69 81 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 CHEK1O14757 476 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 CLN5O75503 358 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 IFNA10P01566 189 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 SLC25A4P12235 298 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 PPP1R1AQ13522 171 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 C2orf83Q53S99 150 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 PVRIGQ6DKI7 326 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 ETFRF1Q6IPR1 90 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 TOMM20LQ6UXN7 152 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 OR4X1Q8NH49 305 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 RNASEH2CQ8TDP1 164 aaKnown RBP4.38□□□□□ -1.71
FOCAD-213ENST00000604254 DTD1Q8TEA8 209 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 NARS2Q96I59 477 aaKnown RBP4.38□□□□□ -1.71
FOCAD-213ENST00000604254 OR10C1Q96KK4 312 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 RHPN1-AS1Q9BWJ2 59 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 RBKSQ9H477 322 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 FNDC4Q9H6D8 234 aaPredicted RBP4.38□□□□□ -1.71
FOCAD-213ENST00000604254 TMEM231Q9H6L2 316 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 RETNQ9HD89 108 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 SMPXQ9UHP9 88 aa4.38□□□□□ -1.71
FOCAD-213ENST00000604254 PUS1Q9Y606 427 aaKnown RBP eCLIP4.38□□□□□ -1.71
FOCAD-213ENST00000604254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
FOCAD-213ENST00000604254 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TRAV30A0A087WSZ9 112 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 LOC102724200A0A096LPH7 203 aaPredicted RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RBMY1BA6NDE4 496 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RBMY1EA6NEQ0 496 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 NDUFB6O95139 128 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 SFT2D2O95562 160 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TMEM50AO95807 157 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 IFNA4P05014 189 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RBMY1DP0C7P1 496 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 IL7P13232 177 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 NPPCP23582 126 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 OR10J1P30954 320 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TFPI2P48307 235 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RND2P52198 227 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 UBE2MP61081 183 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 PAFAH1B2P68402 229 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 BAK1Q16611 211 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TIGITQ495A1 244 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 LINC00322Q6ZN03 302 aaPredicted RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TCF24Q7RTU0 167 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 OR1S2Q8NGQ3 325 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 ST8SIA2Q92186 375 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 ACY3Q96HD9 319 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 ZNF414Q96IQ9 312 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 METTL26Q96S19 204 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 RNF2Q99496 336 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 FAM110AQ9BQ89 295 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 PAIP2BQ9ULR5 123 aaKnown RBP4.37□□□□□ -1.71
FOCAD-213ENST00000604254 TMED3Q9Y3Q3 217 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 U3KQ87 197 aa4.37□□□□□ -1.71
FOCAD-213ENST00000604254 A0A1W2PS18 150 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 FAM90A26D6RGX4 464 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 DNASE2O00115 360 aaPredicted RBP4.36□□□□□ -1.71
FOCAD-213ENST00000604254 MED6O75586 246 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 CD5P06127 495 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 HOXB5P09067 269 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 IGLC1P0CG04 106 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 IAPPP10997 89 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 SLC25A6P12236 298 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 LYL1P12980 280 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 EIF2B2P49770 351 aaKnown RBP4.36□□□□□ -1.71
FOCAD-213ENST00000604254 APOC4P55056 127 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 RAB11AP62491 216 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 MLANAQ16655 118 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 ODF3L2Q3SX64 289 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 C4orf46Q504U0 113 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 PRSS54Q6PEW0 395 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 GBGT1Q8N5D6 347 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 LRTM2Q8N967 370 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 COQ8AQ8NI60 647 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 Q8WTZ3 238 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 NPIPB3Q92617 1050 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 SLC35E1Q96K37 410 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 SDHCQ99643 169 aaPredicted RBP4.36□□□□□ -1.71
FOCAD-213ENST00000604254 C7orf50Q9BRJ6 194 aaKnown RBP4.36□□□□□ -1.71
FOCAD-213ENST00000604254 VSIRQ9H7M9 311 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 FLVCR2Q9UPI3 526 aa4.36□□□□□ -1.71
FOCAD-213ENST00000604254 LYSTQ99698 3801 aa4.35□□□□□ -1.71
FOCAD-213ENST00000604254 C9orf170A2RU37 121 aa4.35□□□□□ -1.71
FOCAD-213ENST00000604254 ZFP92A6NM28 416 aa4.35□□□□□ -1.71
FOCAD-213ENST00000604254 WRBO00258 174 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms