RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 RNF2Q99496 336 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 SDHCQ99643 169 aaPredicted RBP8.64□□□□□ -1.03
CCDC12-209ENST00000604164 GGTLC1Q9BX51 225 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 VSIRQ9H7M9 311 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 PFDN2Q9UHV9 154 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 RBMY1BA6NDE4 496 aaKnown RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 RBMY1EA6NEQ0 496 aaKnown RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 DNASE2O00115 360 aaPredicted RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 LYRM1O43325 122 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 HOXB5P09067 269 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 OR4E1P0C645 316 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 RBMY1DP0C7P1 496 aaKnown RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 IGLC1P0CG04 106 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 NUP62P37198 522 aaPredicted RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 APOC4P55056 127 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
CCDC12-209ENST00000604164 MLANAQ16655 118 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 NPIPB3Q92617 1050 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 SLC35E1Q96K37 410 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 CITED4Q96RK1 184 aa8.63□□□□□ -1.03
CCDC12-209ENST00000604164 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 WRBO00258 174 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 UBE2CO00762 179 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 SYNGR2O43760 224 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 RD3LP0DJH9 198 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 CRYBB3P26998 211 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 DHRS2Q13268 280 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 TIGITQ495A1 244 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 FAM90A2PQ658T7 463 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 ACY3Q96HD9 319 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 WFDC10AQ9H1F0 79 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 MRPL36Q9P0J6 103 aaKnown RBP8.62□□□□□ -1.03
CCDC12-209ENST00000604164 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
CCDC12-209ENST00000604164 KIR2DL5BA0A0G2JN68 375 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 KIR2DL5BA0A0G2JPC4 375 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 DFFBO76075 338 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 TOMM40O96008 361 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC12-209ENST00000604164 BTCP35070 178 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 AP2S1P53680 142 aaPredicted RBP8.61□□□□□ -1.03
CCDC12-209ENST00000604164 MZT2BQ6NZ67 158 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 KIR2DL5AQ8N109 375 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 KIR2DL5BQ8NHK3 375 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 MUC7Q8TAX7 377 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 TMEM170AQ8WVE7 144 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 C20orf85Q9H1P6 137 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 PAIP2BQ9ULR5 123 aaKnown RBP8.61□□□□□ -1.03
CCDC12-209ENST00000604164 FLVCR2Q9UPI3 526 aa8.61□□□□□ -1.03
CCDC12-209ENST00000604164 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 HELTA6NFD8 242 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 ZFP92A6NM28 416 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 IL4P05112 153 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 IAPPP10997 89 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 LYL1P12980 280 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
CCDC12-209ENST00000604164 S100A7P31151 101 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 NKX2-1P43699 371 aaPredicted RBP8.6□□□□□ -1.03
CCDC12-209ENST00000604164 P2RY1P47900 373 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 TFPI2P48307 235 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 OR51G1Q8NGK1 321 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 MITD1Q8WV92 249 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
CCDC12-209ENST00000604164 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 UBQLN2Q9UHD9 624 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
CCDC12-209ENST00000604164 STRAPQ9Y3F4 350 aaKnown RBP8.6□□□□□ -1.03
CCDC12-209ENST00000604164 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 PLA2G10O15496 165 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 CFDP00746 253 aaPredicted RBP8.59□□□□□ -1.03
CCDC12-209ENST00000604164 TCRBP04435 133 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 ID3Q02535 119 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 GAMTQ14353 236 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 ZNF846Q147U1 533 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 OR8G2PQ6IF36 304 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 Q6ZWC4 215 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 GBGT1Q8N5D6 347 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 MAGT1Q9H0U3 335 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 BATF3Q9NR55 127 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 PTTG2Q9NZH5 202 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 TP53TG1Q9Y2A0 90 aa8.59□□□□□ -1.03
CCDC12-209ENST00000604164 IGHV3-66A0A0C4DH42 116 aa8.58□□□□□ -1.04
CCDC12-209ENST00000604164 FAM240BA0A1B0GVZ2 78 aa8.58□□□□□ -1.04
CCDC12-209ENST00000604164 A6NHS1 94 aa8.58□□□□□ -1.04
CCDC12-209ENST00000604164 SNRPGP15A8MWD9 76 aa8.58□□□□□ -1.04
CCDC12-209ENST00000604164 ADAP1O75689 374 aa8.58□□□□□ -1.04
CCDC12-209ENST00000604164 APOHP02749 345 aaPredicted RBP8.58□□□□□ -1.04
CCDC12-209ENST00000604164 PSG1P11464 419 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms