RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
TUBE1-206ENST00000603722 KLF9Q13886 244 aaPredicted RBP12.07□□□□□ -0.48
TUBE1-206ENST00000603722 PYDC2Q56P42 97 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 LYZL2Q7Z4W2 148 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 V9GYH0 126 aa12.07□□□□□ -0.48
TUBE1-206ENST00000603722 TRAV30A0A087WSZ9 112 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 A0A1W2PS18 150 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 IGLC1P0CG04 106 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 SLC25A4P12235 298 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 ANXA3P12429 323 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 CRYBB3P26998 211 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 CCR6P51684 374 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 DEFB131AP59861 70 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 LEMD1Q68G75 181 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 OR1S2Q8NGQ3 325 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 CSTL1Q9H114 145 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 RABAC1Q9UI14 185 aa12.06□□□□□ -0.48
TUBE1-206ENST00000603722 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 CXorf65A6NEN9 183 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 MPTX1A8MV57 137 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 OR10J1P30954 320 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 P2RY1P47900 373 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 AP3S2P59780 193 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 SRPXP78539 464 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 SMCO1Q147U7 214 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 LGI3Q8N145 548 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 TOMM5Q8N4H5 51 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 DTD1Q8TEA8 209 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 ACY3Q96HD9 319 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
TUBE1-206ENST00000603722 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 CACFD1Q9UGQ2 172 aa12.05□□□□□ -0.48
TUBE1-206ENST00000603722 IFNA10P01566 189 aa12.04□□□□□ -0.48
TUBE1-206ENST00000603722 S100A5P33763 92 aa12.04□□□□□ -0.48
TUBE1-206ENST00000603722 RBMS2Q15434 407 aaKnown RBP12.04□□□□□ -0.48
TUBE1-206ENST00000603722 ZNF79Q15937 498 aa12.04□□□□□ -0.48
TUBE1-206ENST00000603722 Q8WTZ3 238 aa12.04□□□□□ -0.48
TUBE1-206ENST00000603722 RBKSQ9H477 322 aa12.04□□□□□ -0.48
TUBE1-206ENST00000603722 CA1P00915 261 aaPredicted RBP12.03□□□□□ -0.48
TUBE1-206ENST00000603722 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
TUBE1-206ENST00000603722 NOXA1Q86UR1 476 aa12.03□□□□□ -0.48
TUBE1-206ENST00000603722 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
TUBE1-206ENST00000603722 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
TUBE1-206ENST00000603722 IL4P05112 153 aa12.02□□□□□ -0.49
TUBE1-206ENST00000603722 VAMP1P23763 118 aa12.02□□□□□ -0.49
TUBE1-206ENST00000603722 YPEL3P61236 119 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-206ENST00000603722 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-206ENST00000603722 TMEM217Q8N7C4 229 aa12.02□□□□□ -0.49
TUBE1-206ENST00000603722 OR1S1Q8NH92 325 aa12.02□□□□□ -0.49
TUBE1-206ENST00000603722 RBM38Q9H0Z9 239 aaKnown RBP12.02□□□□□ -0.49
TUBE1-206ENST00000603722 U3KQ87 197 aa12.02□□□□□ -0.49
TUBE1-206ENST00000603722 K7EQG2 157 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
TUBE1-206ENST00000603722 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 TMEM128Q5BJH2 165 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 CCDC190Q86UF4 302 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 STHQ8IWL8 128 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 GATAD1Q8WUU5 269 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 U3KQE9 123 aa12.01□□□□□ -0.49
TUBE1-206ENST00000603722 NUPR2A6NF83 97 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 TOMM40O96008 361 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 IFNA4P05014 189 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 RD3LP0DJH9 198 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 DCANP1Q8TF63 244 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 RARRES2Q99969 163 aa12□□□□□ -0.49
TUBE1-206ENST00000603722 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
TUBE1-206ENST00000603722 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 DUXBA0A1W2PPF3 345 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 HELTA6NFD8 242 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 IAPPP10997 89 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 ATF4P18848 351 aaPredicted RBP11.99□□□□□ -0.49
TUBE1-206ENST00000603722 EIF2B2P49770 351 aaKnown RBP11.99□□□□□ -0.49
TUBE1-206ENST00000603722 C16orf54Q6UWD8 224 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 OR11H2Q8NH07 326 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 GLMPQ8WWB7 406 aa11.99□□□□□ -0.49
TUBE1-206ENST00000603722 BIRC6Q9NR09 4857 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 KNCNA6PVL3 124 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 PITX3O75364 302 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 PSG1P11464 419 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 DHRS2Q13268 280 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 PPP1R1AQ13522 171 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 SPANXN2Q5MJ10 180 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
TUBE1-206ENST00000603722 DEDD2Q8WXF8 326 aa11.98□□□□□ -0.49
TUBE1-206ENST00000603722 ZFP92A6NM28 416 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 SFT2D2O95562 160 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 PSMG4Q5JS54 123 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 ACTL10Q5JWF8 245 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 TRPT1Q86TN4 253 aaKnown RBP11.97□□□□□ -0.49
TUBE1-206ENST00000603722 CENPSQ8N2Z9 138 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
TUBE1-206ENST00000603722 OR51G1Q8NGK1 321 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms