RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 APOHP02749 345 aaPredicted RBP12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 NPPCP23582 126 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 APOC4P55056 127 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 CMC4P56277 68 aaPredicted RBP12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 TIGITQ495A1 244 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
NOTCH3-205ENST00000600841 IGHV3-66A0A0C4DH42 116 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 A0A1W2PS18 150 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 NAP1L6A6NFF2 107 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 SFT2D2O95562 160 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 OR10J1P30954 320 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 BAK1Q16611 211 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 CSMD3Q7Z407 3707 aa12.49□□□□□ -0.41
NOTCH3-205ENST00000600841 DFFBO76075 338 aa12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 ATP5IP56385 69 aaPredicted RBP12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 UBE2MP61081 183 aaKnown RBP12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 Q8WTZ3 238 aa12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 ACY3Q96HD9 319 aa12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 TMED3Q9Y3Q3 217 aa12.48□□□□□ -0.41
NOTCH3-205ENST00000600841 DNASE2O00115 360 aaPredicted RBP12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 PITX3O75364 302 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 IFNA4P05014 189 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 SLC25A6P12236 298 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 CRYBB3P26998 211 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 APRG1Q8IVJ8 170 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 MS4A6AQ9H2W1 248 aa12.47□□□□□ -0.41
NOTCH3-205ENST00000600841 KIR2DL5BA0A0G2JN68 375 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 KIR2DL5BA0A0G2JPC4 375 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 LINC00854A0A1B0GVQ3 168 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 UBE2CO00762 179 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 NDUFB6O95139 128 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 Q6ZWC4 215 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 KIR2DL5AQ8N109 375 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 STPG3Q8N7X2 389 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 GRAMD2BQ96HH9 432 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 MAP6D1Q9H9H5 199 aa12.46□□□□□ -0.41
NOTCH3-205ENST00000600841 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 CENPXA8MT69 81 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 MED6O75586 246 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 HOXB5P09067 269 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 P2RY1P47900 373 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 IL17DQ8TAD2 202 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
NOTCH3-205ENST00000600841 DYNC2H1Q8NCM8 4307 aaKnown RBP12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 C9orf170A2RU37 121 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 RD3LP0DJH9 198 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 IAPPP10997 89 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 GPX4P36969 197 aaPredicted RBP12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 RAB11AP62491 216 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 CIB3Q96Q77 187 aaPredicted RBP12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 PTTG2Q9NZH5 202 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
NOTCH3-205ENST00000600841 SPRY2O43597 315 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 TOMM40O96008 361 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 IL4P05112 153 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 IL7P13232 177 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 EIF2B2P49770 351 aaKnown RBP12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 ZNF124Q15973 351 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 DEFB135Q30KP9 77 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 GGNBP1Q5YKI7 109 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 SLC35E1Q96K37 410 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 FLVCR2Q9UPI3 526 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 U3KQE9 123 aa12.43□□□□□ -0.42
NOTCH3-205ENST00000600841 RPP30P78346 268 aaKnown RBP12.42□□□□□ -0.42
NOTCH3-205ENST00000600841 COQ8AQ8NI60 647 aa12.42□□□□□ -0.42
NOTCH3-205ENST00000600841 S100ZQ8WXG8 99 aa12.42□□□□□ -0.42
NOTCH3-205ENST00000600841 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
NOTCH3-205ENST00000600841 PAIP2BQ9ULR5 123 aaKnown RBP12.42□□□□□ -0.42
NOTCH3-205ENST00000600841 HELTA6NFD8 242 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 ZFP92A6NM28 416 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 SYNGR2O43760 224 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 OR4E1P0C645 316 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 PSG1P11464 419 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 BTCP35070 178 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 DEFB131AP59861 70 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 DHRS2Q13268 280 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 GAMTQ14353 236 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 USF2Q15853 346 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms