RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 APC2O95996 2303 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 BMPR1BO00238 502 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 MOSP00540 346 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 APELAP0DMC3 54 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 SRIP30626 198 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 DLX1P56177 255 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 DLX6P56179 175 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 MRGPRG-AS1Q2M3A8 158 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 C19orf35Q6ZS72 473 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 LINC00311Q8N616 119 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 SIGLECL1Q8N7X8 197 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 FXYD5Q96DB9 178 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 ABHD17AQ96GS6 310 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 FBXL7Q9UJT9 491 aa16.28■□□□□ 0.2
SHKBP1-225ENST00000600733 PEX7O00628 323 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 ENSAO43768 121 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 GPX1P07203 203 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 BRS3P32247 399 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 COMPP49747 757 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 BPIFB3P59826 476 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 PRB3Q04118 309 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 HCP5Q6MZN7 132 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 FAM71F2Q6NXP2 309 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 LINC00305Q7Z4B0 112 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 RNASE6Q93091 150 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 PAM16Q9Y3D7 125 aa16.27■□□□□ 0.2
SHKBP1-225ENST00000600733 ZZEF1O43149 2961 aa16.27■□□□□ 0.19
SHKBP1-225ENST00000600733 NUTF2P61970 127 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 GNG5P63218 68 aa16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 VMA21Q3ZAQ7 101 aa16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 THAP8Q8NA92 274 aa16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 POLEQ07864 2286 aa16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 C22orf46C9J442 243 aa16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 TBL2Q9Y4P3 447 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-225ENST00000600733 IZUMO1RA6ND01 250 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF253O75346 499 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 HLA-DQA1P01909 254 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 ORM2P19652 201 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 TMEM155Q4W5P6 130 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 OR10J3Q5JRS4 329 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 PRR27Q6MZM9 219 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF705AQ6ZN79 300 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 C8orf31Q8N9H6 132 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 M0R143 59 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 IGHV1-8P0DP01 117 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 AMTP48728 403 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF137PP52743 207 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 KRTDAPP60985 99 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 SGK494Q96LW2 274 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 DYNLRB1Q9NP97 96 aa16.25■□□□□ 0.19
SHKBP1-225ENST00000600733 ABCA1O95477 2261 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 A0A1W2PS18 150 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 IGLC7A0M8Q6 106 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 PMCHP20382 165 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 MFAP2P55001 183 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 SLAQ13239 276 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 COX19Q49B96 90 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 GFRALQ6UXV0 394 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 C11orf42Q8N5U0 333 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 BLNKQ8WV28 456 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 KCNS1Q96KK3 526 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 IGHV3-21A0A0B4J1V1 117 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 RAB4AP20338 218 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 CNTFRP26992 372 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 OR1B1Q8NGR6 318 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 TNFRSF19Q9NS68 423 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 JKAMPQ9P055 326 aa16.24■□□□□ 0.19
SHKBP1-225ENST00000600733 APCSP02743 223 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 TMEM183BQ1AE95 376 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 ASCL5Q7RTU5 278 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 Q8NA96 180 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 NUDT10Q8NFP7 164 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 MBD6Q96DN6 1003 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 NUDT11Q96G61 164 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 C20orf144Q9BQM9 153 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 VAMP8Q9BV40 100 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 NRN1Q9NPD7 142 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 MALRD1Q5VYJ5 2156 aa16.23■□□□□ 0.19
SHKBP1-225ENST00000600733 E7EQL1 145 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 TCAPO15273 167 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 MC5RP33032 325 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF841Q6ZN19 808 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF331Q9NQX6 463 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 ZNF586Q9NXT0 402 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 SHISA9B4DS77 424 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 Q8N976 141 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 TMEM68Q96MH6 324 aa16.22■□□□□ 0.19
SHKBP1-225ENST00000600733 MYCNOSP40205 109 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 TNXAQ16473 311 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 NUP35Q8NFH5 326 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 TMEM133Q9H2Q1 129 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 KAAG1Q9UBP8 84 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 TPRP12270 2363 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 TBR1Q16650 682 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 PRR30Q53SZ7 412 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 GDF5OSQ5U4N7 250 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 FAM231DQ6ZW35 169 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 FAM19A2Q8N3H0 131 aa16.21■□□□□ 0.19
SHKBP1-225ENST00000600733 PRSS33Q8NF86 280 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms