RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 DLK1P80370 383 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 AKR1C1Q04828 323 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 GAMTQ14353 236 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 LILRB2Q8N423 598 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 Q8WTZ3 238 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 UFC1Q9Y3C8 167 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 VWFP04275 2813 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 NDUFA4O00483 81 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 TMEM252Q8N6L7 170 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 NPVFQ9HCQ7 196 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
USHBP1-210ENST00000600286 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 LGALS9O00182 355 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 CST7O76096 145 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 BAXQ07812 192 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 SLC38A11Q08AI6 406 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 RAB31Q13636 194 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 ACOT7LQ6ZUV0 252 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 OR2T35Q8NGX2 323 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 WDR89Q96FK6 387 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-210ENST00000600286 GINS3Q9BRX5 216 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 C11orf1Q9H5F2 150 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 MBD2Q9UBB5 411 aa12.8□□□□□ -0.36
USHBP1-210ENST00000600286 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 SEC14L6B5MCN3 397 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
USHBP1-210ENST00000600286 H0YIZ8 118 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 RPL12P30050 165 aaKnown RBP12.79□□□□□ -0.36
USHBP1-210ENST00000600286 INSL3P51460 131 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
USHBP1-210ENST00000600286 C9orf66Q5T8R8 295 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 REC114Q7Z4M0 266 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 TMEM144Q7Z5S9 345 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 TMEM217Q8N7C4 229 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
USHBP1-210ENST00000600286 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
USHBP1-210ENST00000600286 PMS2P5A8MQ11 134 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 SAP30O75446 220 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 CFDP00746 253 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-210ENST00000600286 IGLC1P0CG04 106 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 BMI1P35226 326 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 ADMP35318 185 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 ELLP55199 621 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-210ENST00000600286 TIGITQ495A1 244 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 INO80EQ8NBZ0 244 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-210ENST00000600286 NARS2Q96I59 477 aaKnown RBP12.78□□□□□ -0.36
USHBP1-210ENST00000600286 MRPL36Q9P0J6 103 aaKnown RBP12.78□□□□□ -0.36
USHBP1-210ENST00000600286 PFDN2Q9UHV9 154 aa12.78□□□□□ -0.36
USHBP1-210ENST00000600286 IGSF23A1L1A6 192 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 LYL1P12980 280 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
USHBP1-210ENST00000600286 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 TRGV9Q99603 122 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 UQCC1Q9NVA1 299 aa12.77□□□□□ -0.37
USHBP1-210ENST00000600286 PUS1Q9Y606 427 aaKnown RBP eCLIP12.77□□□□□ -0.37
USHBP1-210ENST00000600286 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 K7EMT4 169 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 CCNKO75909 580 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 IGKV1-17P01599 117 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 IGLL1P15814 213 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 S100A7P31151 101 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 NHLH2Q02577 135 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 THAP8Q8NA92 274 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
USHBP1-210ENST00000600286 DAZ1Q9NQZ3 744 aaKnown RBP12.76□□□□□ -0.37
USHBP1-210ENST00000600286 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 TRAV14DV4A0A0A6YYC5 116 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 TOMM40O96008 361 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 SELENOTP62341 195 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 ARL16Q0P5N6 197 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 BPIFCQ8NFQ6 507 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 OR51G1Q8NGK1 321 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
USHBP1-210ENST00000600286 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
USHBP1-210ENST00000600286 A8MWP6 167 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 DFFBO76075 338 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 NPPCP23582 126 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 S100A7AQ86SG5 101 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 METTL26Q96S19 204 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 HSPB11Q9Y547 144 aa12.74□□□□□ -0.37
USHBP1-210ENST00000600286 A0A1W2PS18 150 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 C2orf70A6NJV1 201 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms