RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 ZNF257Q9Y2Q1 563 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 IGLV2-18A0A075B6J9 118 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 PRAF2O60831 178 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 ACTL6BO94805 426 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 RPL27AP46776 148 aaKnown RBP12.76□□□□□ -0.37
SSBP4-207ENST00000600244 OXA1LQ15070 435 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 FKBP11Q9NYL4 201 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
SSBP4-207ENST00000600244 SNRPGP15A8MWD9 76 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 PITX3O75364 302 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
SSBP4-207ENST00000600244 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 SLC25A6P12236 298 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 TNP2Q05952 138 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 C1orf134Q5TEV5 83 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 APRG1Q8IVJ8 170 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 OR1L8Q8NGR8 309 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 SPIN2AQ99865 258 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 SPIN2BQ9BPZ2 258 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 SRSF8Q9BRL6 282 aaKnown RBP12.75□□□□□ -0.37
SSBP4-207ENST00000600244 QTRT1Q9BXR0 403 aaKnown RBP12.75□□□□□ -0.37
SSBP4-207ENST00000600244 COMMD5Q9GZQ3 224 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
SSBP4-207ENST00000600244 IGLC7A0M8Q6 106 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 DHFRP00374 187 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 IGHV3-23P01764 117 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 INAFM2P0DMQ5 153 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-207ENST00000600244 HSPE1P61604 102 aaKnown RBP12.74□□□□□ -0.37
SSBP4-207ENST00000600244 GGNBP1Q5YKI7 109 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 THOC7Q6I9Y2 204 aaKnown RBP12.74□□□□□ -0.37
SSBP4-207ENST00000600244 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-207ENST00000600244 CACNG5Q9UF02 275 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 MYCBP2O75592 4640 aa12.74□□□□□ -0.37
SSBP4-207ENST00000600244 A0A1B0GU03 582 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 HMX3A6NHT5 357 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 ADAP1O75689 374 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 HOXB5P09067 269 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 TRAPPC2P0DI81 140 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 TRAPPC2BP0DI82 140 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 SULT1A3P0DMM9 295 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 SULT1A4P0DMN0 295 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 SMCO1Q147U7 214 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 ZNF124Q15973 351 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 KLK9Q2XQG4 91 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 C12orf45Q8N5I9 185 aaPredicted RBP12.73□□□□□ -0.37
SSBP4-207ENST00000600244 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
SSBP4-207ENST00000600244 GPN1Q9HCN4 374 aaPredicted RBP12.73□□□□□ -0.37
SSBP4-207ENST00000600244 KLK9Q9UKQ9 250 aa12.73□□□□□ -0.37
SSBP4-207ENST00000600244 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 CRYGCP07315 174 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 PRCDQ00LT1 54 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 OR10W1Q8NGF6 305 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 FYTTD1Q96QD9 318 aaKnown RBP12.72□□□□□ -0.37
SSBP4-207ENST00000600244 S4R3C0 116 aa12.72□□□□□ -0.37
SSBP4-207ENST00000600244 SRRM2Q9UQ35 2752 aaKnown RBP12.72□□□□□ -0.37
SSBP4-207ENST00000600244 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 IFNA10P01566 189 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 AREGP15514 252 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 PSMB6P28072 239 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 WT1-ASQ06250 92 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
SSBP4-207ENST00000600244 FANCD2OSQ96PS1 177 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 NDUFAF3Q9BU61 184 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 CACFD1Q9UGQ2 172 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.37
SSBP4-207ENST00000600244 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 SPCS3P61009 180 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 LAMTOR1Q6IAA8 161 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 OR10C1Q96KK4 312 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 SCRT1Q9BWW7 348 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
SSBP4-207ENST00000600244 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
SSBP4-207ENST00000600244 CA1P00915 261 aaPredicted RBP12.69□□□□□ -0.38
SSBP4-207ENST00000600244 IFNA21P01568 189 aa12.69□□□□□ -0.38
SSBP4-207ENST00000600244 CLEC3BP05452 202 aa12.69□□□□□ -0.38
SSBP4-207ENST00000600244 ALG5Q9Y673 324 aa12.69□□□□□ -0.38
SSBP4-207ENST00000600244 ELOA3CA0A087WX78 387 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-207ENST00000600244 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
SSBP4-207ENST00000600244 IFNA17P01571 189 aa12.68□□□□□ -0.38
SSBP4-207ENST00000600244 OR4D5Q8NGN0 318 aa12.68□□□□□ -0.38
SSBP4-207ENST00000600244 EEF1AKMT3Q96AZ1 226 aa12.68□□□□□ -0.38
SSBP4-207ENST00000600244 FAT1Q14517 4588 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 CCSO14618 274 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 OR13C7P0DN81 318 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 ID3Q02535 119 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 IL15RAQ13261 267 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms