RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 REG4Q9BYZ8 158 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 HBDP02042 147 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 CLPSP04118 112 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 GCSAMLQ5JQS6 135 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.49
SYMPK-215ENST00000600237 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 QRFPP83859 136 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 JKAMPQ9P055 326 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 SPCS1Q9Y6A9 102 aa12.02□□□□□ -0.49
SYMPK-215ENST00000600237 SNAI2O43623 268 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 Q6ZS49 121 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 RPP25LQ8N5L8 163 aaKnown RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 BEX4Q9NWD9 120 aaPredicted RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
SYMPK-215ENST00000600237 OR4X2Q8NGF9 303 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 CREBBPQ92793 2442 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 H3BRM9 83 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 TMEM50AO95807 157 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 MYOD1P15172 320 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 C8orf46Q8TAG6 207 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 DMRTA2Q96SC8 542 aa12.01□□□□□ -0.49
SYMPK-215ENST00000600237 TP53BP1Q12888 1972 aaPredicted RBP12□□□□□ -0.49
SYMPK-215ENST00000600237 PLSCR4Q9NRQ2 329 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 IGHV3OR16-8A0A075B7F1 116 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 IGKV1-5P01602 117 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 ST6GALNAC3Q8NDV1 305 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 HAX1O00165 279 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 PSPNO60542 156 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 PSMB11A5LHX3 300 aa12□□□□□ -0.49
SYMPK-215ENST00000600237 CXCL1P09341 107 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 LEPP41159 167 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 LINC01551Q86U37 167 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 C7orf69Q9H7B7 122 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 KLHDC3Q9BQ90 382 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 ANK1P16157 1881 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 SPTAN1Q13813 2472 aaKnown RBP11.99□□□□□ -0.49
SYMPK-215ENST00000600237 CACNA1HO95180 2353 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 IL18BPO95998 194 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 LYL1P12980 280 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 CFPP27918 469 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 CDKN1AP38936 164 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 EMP1P54849 157 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 BMPERQ8N8U9 685 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 OR5AN1Q8NGI8 311 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 CLDN16Q9Y5I7 305 aa11.99□□□□□ -0.49
SYMPK-215ENST00000600237 NBASA2RRP1 2371 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 MPDZO75970 2070 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 TRAV21A0A0B4J279 112 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 AMBPP02760 352 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 TFF1P04155 84 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 LY96Q9Y6Y9 160 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 F2Z2F3 143 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 RASL11AQ6T310 242 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 UNQ6494/PRO21346Q6UXR6 183 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 CACNG7P62955 275 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 GLRX5Q86SX6 157 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 VCX2Q9H322 139 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 TIMM23O14925 209 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 RHOGP84095 191 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
SYMPK-215ENST00000600237 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 AGMATQ9BSE5 352 aa11.98□□□□□ -0.49
SYMPK-215ENST00000600237 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 FOXL2NBQ6ZUU3 175 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 LINC00469Q8N7U9 141 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 ST20Q9HBF5 79 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 TGFAP01135 160 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYMPK-215ENST00000600237 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
SYMPK-215ENST00000600237 DPM2O94777 84 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 OR13C6PQ8NH95 151 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 COQ2Q96H96 371 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
SYMPK-215ENST00000600237 RNF5Q99942 180 aa11.97□□□□□ -0.49
SYMPK-215ENST00000600237 A0A1B0GV72 72 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 APOMO95445 188 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 OR10W1Q8NGF6 305 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 PI4KAP42356 2102 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 TNFSF13O75888 250 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 Q0VFX4 171 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 CYSLTR1Q9Y271 337 aa11.96□□□□□ -0.49
SYMPK-215ENST00000600237 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.5
SYMPK-215ENST00000600237 IGHV3-11P01762 117 aa11.96□□□□□ -0.5
SYMPK-215ENST00000600237 PF4P02776 101 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms