RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	DUX3	Q96PT4	197 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	NPVF	Q9HCQ7	196 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	GNG7	O60262	68 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	FCGR2B	P31994	310 aa	Predicted RBP	16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	ZNF343	Q6P1L6	599 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	KCNRG	Q8N5I3	272 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	NPIPB3	Q92617	1050 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	RAX2	Q96IS3	184 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	ATP5S	Q99766	215 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	FBXL17	Q9UF56	701 aa		16.94	■□□□□ 0.3
LTBP4-227	ENST00000600026	TRAV30	A0A087WSZ9	112 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	TAAR5	O14804	337 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	CLN5	O75503	358 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	CLEC19A	Q6UXS0	136 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	PPP1R14B	Q96C90	147 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	CCDC140	Q96MF4	163 aa		16.93	■□□□□ 0.3
LTBP4-227	ENST00000600026	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	IFNA5	P01569	189 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	PF4	P02776	101 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	CXCL2	P19875	107 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	VWC2	Q2TAL6	325 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	TMEM144	Q7Z5S9	345 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	ARL6	Q9H0F7	186 aa		16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	MRPL36	Q9P0J6	103 aa	Known RBP	16.92	■□□□□ 0.3
LTBP4-227	ENST00000600026	UBE2L5P	A0A1B0GUS4	154 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	KANTR	A0A1W2PQU2	76 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	ANKRD34B	A5PLL1	514 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	CCL24	O00175	119 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	CLEC3B	P05452	202 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	HNRNPC	P07910	306 aa	Known RBP eCLIP	16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	GPR183	P32249	361 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	MYCNOS	P40205	109 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	LGALSL	Q3ZCW2	172 aa	Predicted RBP	16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	TMUB2	Q71RG4	321 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	OR11H1	Q8NG94	326 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	ARPC5L	Q9BPX5	153 aa		16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	PEF1	Q9UBV8	284 aa	Known RBP	16.91	■□□□□ 0.3
LTBP4-227	ENST00000600026	IGHV4OR15-8	A0A075B7B6	117 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026		A0A087WW49	117 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	OR2T8	A6NH00	312 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	ZFP92	A6NM28	416 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	NUPL2	O15504	423 aa	Known RBP	16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	OR10J1	P30954	320 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	ARL3	P36405	182 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	FHL3	Q13643	280 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	ZNF266	Q14584	549 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	SPSB3	Q6PJ21	355 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	TEPP	Q6URK8	271 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	TREML4	Q6UXN2	200 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	THAP8	Q8NA92	274 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	OR1N2	Q8NGR9	330 aa		16.9	■□□□□ 0.3
LTBP4-227	ENST00000600026	BORCS7-ASMT	A0A0B4J1R7	106 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	TGOLN2	O43493	480 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	C4BPB	P20851	252 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	NKX2-5	P52952	324 aa	Predicted RBP	16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	RAB31	Q13636	194 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	SCGB1C1	Q8TD33	95 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	WFDC1	Q9HC57	220 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026	WDR83OS	Q9Y284	106 aa		16.89	■□□□□ 0.29
LTBP4-227	ENST00000600026		F8W735	103 aa	Predicted RBP	16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	LINC01619	G3V211	115 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	BOLA2-SMG1P6	H3BVE0	249 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	BCL2L11	O43521	198 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	MPDU1	O75352	247 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	TRBV12-3	P01733	135 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	HSPB1	P04792	205 aa	Known RBP	16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	FABP1	P07148	127 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	FGF7	P21781	194 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	ZNF616	Q08AN1	781 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	C9orf62	Q8N4C0	152 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	LINC00482	Q8N8I6	264 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	DPF1	Q92782	380 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	WNK1	Q9H4A3	2382 aa		16.88	■□□□□ 0.29
LTBP4-227	ENST00000600026	GGCT	O75223	188 aa	Known RBP	16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	CTSG	P08311	255 aa		16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	IGLC1	P0CG04	106 aa		16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	BTNL8	Q6UX41	500 aa		16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	TRGV9	Q99603	122 aa		16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	PARD6G	Q9BYG4	376 aa	Predicted RBP	16.87	■□□□□ 0.29
LTBP4-227	ENST00000600026	PPP5D1	E7EU14	171 aa		16.86	■□□□□ 0.29
LTBP4-227	ENST00000600026	JTB	O76095	146 aa		16.86	■□□□□ 0.29
LTBP4-227	ENST00000600026	TIGIT	Q495A1	244 aa		16.86	■□□□□ 0.29
LTBP4-227	ENST00000600026	WDR61	Q9GZS3	305 aa	Known RBP	16.86	■□□□□ 0.29
LTBP4-227	ENST00000600026	LSM4	Q9Y4Z0	139 aa	Known RBP	16.86	■□□□□ 0.29
LTBP4-227	ENST00000600026	IGKV1OR2-108	A0A075B7D4	117 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	CAMLG	P49069	296 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	SLURP1	P55000	103 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	YPEL3	P61236	119 aa	Predicted RBP	16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	REL	Q04864	619 aa	Predicted RBP	16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	RPL7L1	Q6DKI1	246 aa	Known RBP	16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	LAMTOR1	Q6IAA8	161 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	ZNF709	Q8N972	641 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	CHRDL1	Q9BU40	450 aa		16.85	■□□□□ 0.29
LTBP4-227	ENST00000600026	IGKV1D-37	A0A075B6S9	117 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	C17orf112	F2Z3M2	114 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	BMPR1B	O00238	502 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	IGKV1-17	P01599	117 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	ADM	P35318	185 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	SELENOT	P62341	195 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	EIF5A	P63241	154 aa	Known RBP	16.84	■□□□□ 0.29

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms