RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 OR5AC1P0C628 307 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 HLA-DMBP28068 263 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 RND2P52198 227 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 YPEL3P61236 119 aaPredicted RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 NUTF2P61970 127 aaKnown RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 MRPS10P82664 201 aaKnown RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 DHODHQ02127 395 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 MEF2DQ14814 521 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 RBMY1FQ15415 496 aaKnown RBP10.61□□□□□ -0.71
EBI3-202ENST00000599339 ETFRF1Q6IPR1 90 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 NOXA1Q86UR1 476 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 TBC1D24Q9ULP9 559 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 AGRNO00468 2067 aa10.61□□□□□ -0.71
EBI3-202ENST00000599339 DISC1C4P0D8 188 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 C4BPBP20851 252 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 OR10J1P30954 320 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRR20EP86478 221 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRR20CP86479 221 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRR20DP86480 221 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRR20BP86481 221 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRR20AP86496 221 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
EBI3-202ENST00000599339 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PSMG4Q5JS54 123 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 Q6ZRM9 215 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 GLYATL2Q8WU03 294 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 NAA60Q9H7X0 242 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 CACNG5Q9UF02 275 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 U3KQE9 123 aa10.6□□□□□ -0.71
EBI3-202ENST00000599339 GSTZ1O43708 216 aaPredicted RBP10.59□□□□□ -0.71
EBI3-202ENST00000599339 CTF1Q16619 201 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 RAB40CQ96S21 281 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 SEPSECSQ9HD40 501 aaKnown RBP10.59□□□□□ -0.71
EBI3-202ENST00000599339 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 X6R8D5 127 aa10.59□□□□□ -0.71
EBI3-202ENST00000599339 RGS5O15539 181 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 IL4P05112 153 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 NPY1RP25929 384 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
EBI3-202ENST00000599339 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 Q6ZTC4 211 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
EBI3-202ENST00000599339 RTBDNQ9BSG5 229 aaPredicted RBP10.58□□□□□ -0.72
EBI3-202ENST00000599339 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 NAA50Q9GZZ1 169 aaKnown RBP10.58□□□□□ -0.72
EBI3-202ENST00000599339 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 PFDN2Q9UHV9 154 aa10.58□□□□□ -0.72
EBI3-202ENST00000599339 DNAH10Q8IVF4 4471 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 ELOA3CA0A087WX78 387 aaPredicted RBP10.57□□□□□ -0.72
EBI3-202ENST00000599339 FAM90A26D6RGX4 464 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 PRRT1Q99946 306 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 KCNIP3Q9Y2W7 256 aa10.57□□□□□ -0.72
EBI3-202ENST00000599339 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 TOMM40O96008 361 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 IFNA10P01566 189 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 AKAIN1P0CW23 69 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 SULT1A3P0DMM9 295 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 SULT1A4P0DMN0 295 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 USF2Q15853 346 aaPredicted RBP10.56□□□□□ -0.72
EBI3-202ENST00000599339 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 SIGLEC15Q6ZMC9 328 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 SMIM4Q8WVI0 70 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 NPIPB3Q92617 1050 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 IL22RA2Q969J5 263 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 ACY3Q96HD9 319 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 RABL2AQ9UBK7 228 aaPredicted RBP10.56□□□□□ -0.72
EBI3-202ENST00000599339 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
EBI3-202ENST00000599339 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
EBI3-202ENST00000599339 BUB3O43684 328 aa10.55□□□□□ -0.72
EBI3-202ENST00000599339 LINC00336Q6ZUF6 198 aa10.55□□□□□ -0.72
EBI3-202ENST00000599339 SCGB3A2Q96PL1 93 aa10.55□□□□□ -0.72
EBI3-202ENST00000599339 U3KQ87 197 aa10.55□□□□□ -0.72
EBI3-202ENST00000599339 VPS13DQ5THJ4 4388 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 H3BMM0 161 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 AMBPP02760 352 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 IL18Q14116 193 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 OR51G1Q8NGK1 321 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 MIXL1Q9H2W2 232 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
EBI3-202ENST00000599339 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms