RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 METTL26Q96S19 204 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 RABAC1Q9UI14 185 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 IGHV3-48P01763 117 aa12.4□□□□□ -0.42
PNKP-210ENST00000597965 H2AFB2P0C5Z0 115 aa12.4□□□□□ -0.42
PNKP-210ENST00000597965 FAAP20Q6NZ36 180 aa12.4□□□□□ -0.42
PNKP-210ENST00000597965 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
PNKP-210ENST00000597965 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
PNKP-210ENST00000597965 ALG5Q9Y673 324 aa12.4□□□□□ -0.42
PNKP-210ENST00000597965 TRAV6A0A075B6T7 132 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 DEFB4AO15263 64 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 NDUFB6O95139 128 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 RAB3DO95716 219 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 TMEM50AO95807 157 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 IFNA17P01571 189 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 Q8NAQ8 132 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 ENY2Q9NPA8 101 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 MCUBQ9NWR8 336 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 APLNQ9ULZ1 77 aa12.39□□□□□ -0.43
PNKP-210ENST00000597965 TRAV30A0A087WSZ9 112 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
PNKP-210ENST00000597965 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 AKR1C2P52895 323 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 AP2S1P53680 142 aaPredicted RBP12.38□□□□□ -0.43
PNKP-210ENST00000597965 PRR20EP86478 221 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 PRR20CP86479 221 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 PRR20DP86480 221 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 PRR20BP86481 221 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 PRR20AP86496 221 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 CD300CQ08708 224 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
PNKP-210ENST00000597965 IGHV3-66A0A0C4DH42 116 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 M0QYG6 137 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 CLN5O75503 358 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 CRYBB3P26998 211 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 OPRK1P41145 380 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
PNKP-210ENST00000597965 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
PNKP-210ENST00000597965 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 C20orf85Q9H1P6 137 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 FLVCR2Q9UPI3 526 aa12.37□□□□□ -0.43
PNKP-210ENST00000597965 IGHV4-28A0A0C4DH34 117 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 A0A1B0GU03 582 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 HELTA6NFD8 242 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 ZNF705EA8MWA4 302 aaPredicted RBP12.36□□□□□ -0.43
PNKP-210ENST00000597965 K7EQG2 157 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 B3GALNT1O75752 331 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
PNKP-210ENST00000597965 PGAM2P15259 253 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 TBPP20226 339 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 P2RY1P47900 373 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 HOXA1P49639 335 aaPredicted RBP12.36□□□□□ -0.43
PNKP-210ENST00000597965 RND3P61587 244 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 MEF2DQ14814 521 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 LILRB2Q8N423 598 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 OR4X1Q8NH49 305 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 RNF126Q9BV68 326 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
PNKP-210ENST00000597965 RPS10-NUDT3A0A1W2PQS6 291 aa12.35□□□□□ -0.43
PNKP-210ENST00000597965 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
PNKP-210ENST00000597965 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
PNKP-210ENST00000597965 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
PNKP-210ENST00000597965 RRNAD1Q96FB5 475 aaKnown RBP12.35□□□□□ -0.43
PNKP-210ENST00000597965 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 PRAF2O60831 178 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 IL5P05113 134 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
PNKP-210ENST00000597965 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 PIGPP57054 158 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
PNKP-210ENST00000597965 SPINK9Q5DT21 86 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
PNKP-210ENST00000597965 C3orf85A0A1B0GTC6 90 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 CCNKO75909 580 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 GIG44P09565 113 aaPredicted RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 RNASE2P10153 161 aaKnown RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 NPY1RP25929 384 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 RRAS2P62070 204 aaPredicted RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 ACTL10Q5JWF8 245 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 Q6ZTC4 211 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 OR13C8Q8NGS7 320 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 RNASE11Q8TAA1 199 aaKnown RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 ZFAND1Q8TCF1 268 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 DCANP1Q8TF63 244 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms