RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	NARS2	Q96I59	477 aa	Known RBP	7.62	□□□□□ -1.19
LSM4-205	ENST00000597776	TMEM222	Q9H0R3	208 aa		7.62	□□□□□ -1.19
LSM4-205	ENST00000597776	MIXL1	Q9H2W2	232 aa		7.62	□□□□□ -1.19
LSM4-205	ENST00000597776	HEYL	Q9NQ87	328 aa	Predicted RBP	7.62	□□□□□ -1.19
LSM4-205	ENST00000597776	CACNG5	Q9UF02	275 aa		7.62	□□□□□ -1.19
LSM4-205	ENST00000597776		U3KQE9	123 aa		7.62	□□□□□ -1.19
LSM4-205	ENST00000597776	TRAV30	A0A087WSZ9	112 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	HELT	A6NFD8	242 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	C11orf94	C9JXX5	98 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	CDS2	O95674	445 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	SMIM18	P0DKX4	95 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	MIF	P14174	115 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	ZNF182	P17025	639 aa	Predicted RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	OR10J1	P30954	320 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	TAS2R19	P59542	299 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	DHODH	Q02127	395 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	MEF2D	Q14814	521 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	USF2	Q15853	346 aa	Predicted RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	TMEM41B	Q5BJD5	291 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	C16orf54	Q6UWD8	224 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	ZNF767P	Q75MW2	155 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	SELENOH	Q8IZQ5	122 aa	Known RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	CSNK1G2-AS1	Q8NCQ2	148 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	OR1S2	Q8NGQ3	325 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	GLYATL2	Q8WU03	294 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	TMEM170A	Q8WVE7	144 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	RBPMS	Q93062	196 aa	Known RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	GPR146	Q96CH1	333 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	RAB40C	Q96S21	281 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	RTBDN	Q9BSG5	229 aa	Predicted RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	NAA60	Q9H7X0	242 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	TBC1D24	Q9ULP9	559 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	CELA1	Q9UNI1	258 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	C14orf166	Q9Y224	244 aa	Known RBP	7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	FAT2	Q9NYQ8	4349 aa		7.61	□□□□□ -1.19
LSM4-205	ENST00000597776	DNAH2	Q9P225	4427 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	IGHV4-4	A0A075B6R2	117 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	TRAV10	A0A0B4J240	114 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	CEBPZOS	A8MTT3	80 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	FAM90A26	D6RGX4	464 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	GABARAP	H6UMI1	98 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	B3GALNT1	O75752	331 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	HNRNPC	P07910	306 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	EIF2B2	P49770	351 aa	Known RBP	7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	C2orf83	Q53S99	150 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	GPR107	Q5VW38	600 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	TMEM268	Q5VZI3	342 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	FAM219A	Q8IW50	185 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	SLC24A4	Q8NFF2	622 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	OR52E5	Q8NH55	327 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.6	□□□□□ -1.19
LSM4-205	ENST00000597776		Q8WTZ3	238 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	NPIPB3	Q92617	1050 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	ACY3	Q96HD9	319 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	PRR13	Q9NZ81	148 aa		7.6	□□□□□ -1.19
LSM4-205	ENST00000597776	CRYM-AS1	A6NIL9	109 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	RGS5	O15539	181 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	IL4	P05112	153 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	SLC25A4	P12235	298 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	NPY1R	P25929	384 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	YPEL3	P61236	119 aa	Predicted RBP	7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	C12orf74	Q32Q52	190 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	OR4C16	Q8NGL9	310 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	SCRT1	Q9BWW7	348 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	XCL2	Q9UBD3	114 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	KIAA1109	Q2LD37	5005 aa		7.59	□□□□□ -1.19
LSM4-205	ENST00000597776	CTDSP2	O14595	271 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	RD3L	P0DJH9	198 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	DEFB1	P60022	68 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	SNRPD3	P62318	126 aa	Known RBP	7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	CENPS	Q8N2Z9	138 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	OR51G1	Q8NGK1	321 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	C15orf40	Q8WUR7	153 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	SMIM4	Q8WVI0	70 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	NRN1	Q9NPD7	142 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	PKHD1	P08F94	4074 aa		7.58	□□□□□ -1.2
LSM4-205	ENST00000597776	DEFB131B	A0A096LNP1	70 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	DISC1	C4P0D8	188 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776		H3BMM0	161 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	BUB3	O43684	328 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	TOMM40	O96008	361 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	IGKV3-20	P01619	116 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SULT1A3	P0DMM9	295 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SULT1A4	P0DMN0	295 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	PSG1	P11464	419 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	AP2S1	P53680	142 aa	Predicted RBP	7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SSBP1	Q04837	148 aa	Known RBP	7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SPCS2	Q15005	226 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SURF2	Q15527	256 aa	Predicted RBP	7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	NMS	Q5H8A3	153 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	GSG1L	Q6UXU4	331 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	SIGLEC15	Q6ZMC9	328 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	OR51S1	Q8NGJ8	323 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	RNF126	Q9BV68	326 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	GPR132	Q9UNW8	380 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	TMEM56-RWDD3	S4R434	201 aa		7.57	□□□□□ -1.2
LSM4-205	ENST00000597776	DNAH17	Q9UFH2	4485 aa		7.56	□□□□□ -1.2

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