RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ATP5SQ99766 215 aa11.55□□□□□ -0.56
TRIM28-207ENST00000597136 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
TRIM28-207ENST00000597136 UQCC1Q9NVA1 299 aa11.55□□□□□ -0.56
TRIM28-207ENST00000597136 S4R3C0 116 aa11.55□□□□□ -0.56
TRIM28-207ENST00000597136 A0A0G2JLM5 398 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 TAAR5O14804 337 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 LGALS1P09382 135 aaKnown RBP11.54□□□□□ -0.56
TRIM28-207ENST00000597136 RUNX1Q01196 453 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 ACY3Q96HD9 319 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 IGHV4OR15-8A0A075B7B6 117 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 A0A087WW49 117 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 BCL2L11O43521 198 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 DFFBO76075 338 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 MYCNOSP40205 109 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 RND2P52198 227 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 MFAP4P55083 255 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 LINC00482Q8N8I6 264 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 OR1N2Q8NGR9 330 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 EEF1AKMT3Q96AZ1 226 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 NPVFQ9HCQ7 196 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
TRIM28-207ENST00000597136 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 KANTRA0A1W2PQU2 76 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
TRIM28-207ENST00000597136 AKR1C1Q04828 323 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 WFDC9Q8NEX5 89 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 TXN2Q99757 166 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 BOLA1Q9Y3E2 137 aa11.53□□□□□ -0.56
TRIM28-207ENST00000597136 IGKV1OR2-108A0A075B7D4 117 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
TRIM28-207ENST00000597136 NPBWR1P48145 328 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 SLURP1P55000 103 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 FHL3Q13643 280 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 RPL7L1Q6DKI1 246 aaKnown RBP11.52□□□□□ -0.57
TRIM28-207ENST00000597136 ZNF343Q6P1L6 599 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 UBAC2Q8NBM4 344 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 WDR83OSQ9Y284 106 aa11.52□□□□□ -0.57
TRIM28-207ENST00000597136 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
TRIM28-207ENST00000597136 CLN5O75503 358 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 IFNA5P01569 189 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 CD33P20138 364 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 ZNF616Q08AN1 781 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 ZNF266Q14584 549 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 OPCMLQ14982 345 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 Q56UQ5 140 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 TEPPQ6URK8 271 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 DPF1Q92782 380 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 ATP6V0BQ99437 205 aa11.51□□□□□ -0.57
TRIM28-207ENST00000597136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 BORCS7-ASMTA0A0B4J1R7 106 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 JTBO76095 146 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 HSPB1P04792 205 aaKnown RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 CLEC3BP05452 202 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 IGLL1P15814 213 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 C4BPBP20851 252 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 FGF7P21781 194 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 BTNL8Q6UX41 500 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 CLEC19AQ6UXS0 136 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 C1QL4Q86Z23 238 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 PARD6GQ9BYG4 376 aaPredicted RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 WDR61Q9GZS3 305 aaKnown RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 MEGF8Q7Z7M0 2845 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 IGKV1D-37A0A075B6S9 117 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 LINC01619G3V211 115 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 G3V4G9 280 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 GNG7O60262 68 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 CTSGP08311 255 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 OR10J1P30954 320 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 GPR183P32249 361 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
TRIM28-207ENST00000597136 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 ZNF471Q9BX82 626 aaPredicted RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
TRIM28-207ENST00000597136 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 MPDU1O75352 247 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 TRGV9Q99603 122 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 MGST2Q99735 147 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
TRIM28-207ENST00000597136 AGPAT2O15120 278 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms