RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 UQCC1Q9NVA1 299 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 S4R3C0 116 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 K7EIM0 57 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 NPY1RP25929 384 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 ETV3LQ6ZN32 361 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
DDX49-204ENST00000595858 IGHV3-21A0A0B4J1V1 117 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 I3L2K1 104 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 CORTO00230 105 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 LY86O95711 162 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 HSPB1P04792 205 aaKnown RBP11.54□□□□□ -0.56
DDX49-204ENST00000595858 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 MYCNOSP40205 109 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 OR1N2Q8NGR9 330 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
DDX49-204ENST00000595858 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
DDX49-204ENST00000595858 PEF1Q9UBV8 284 aaKnown RBP11.54□□□□□ -0.56
DDX49-204ENST00000595858 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.53□□□□□ -0.56
DDX49-204ENST00000595858 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 E5RGE8 158 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 SSSCA1O60232 199 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 TMEM50AO95807 157 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 MT-CO2P00403 227 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
DDX49-204ENST00000595858 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
DDX49-204ENST00000595858 UBAC2Q8NBM4 344 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 ZNF502Q8TBZ5 544 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
DDX49-204ENST00000595858 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 A0A087WW49 117 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 C15orf62A8K5M9 175 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 PF4P02776 101 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 PAX9P55771 341 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 ZNF616Q08AN1 781 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 FHL3Q13643 280 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 MLANAQ16655 118 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 GUCA2BQ16661 112 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 FAM209BQ5JX69 171 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 DPF1Q92782 380 aa11.53□□□□□ -0.56
DDX49-204ENST00000595858 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
DDX49-204ENST00000595858 LINC01619G3V211 115 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 IGHV3-48P01763 117 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 CLEC3BP05452 202 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
DDX49-204ENST00000595858 AKR1C1Q04828 323 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 SPANXN5Q5MJ07 72 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 LYPD6BQ8NI32 183 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 RNASEH2CQ8TDP1 164 aaKnown RBP11.52□□□□□ -0.57
DDX49-204ENST00000595858 ARV1Q9H2C2 271 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 FNDC4Q9H6D8 234 aaPredicted RBP11.52□□□□□ -0.57
DDX49-204ENST00000595858 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 PSENENQ9NZ42 101 aa11.52□□□□□ -0.57
DDX49-204ENST00000595858 H3BP45 60 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 IFNA4P05014 189 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 CD5P06127 495 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 OPRK1P41145 380 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 TAS2R30P59541 319 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 PRR31Q5SQ13 230 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 FBXL17Q9UF56 701 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 BORCS7-ASMTA0A0B4J1R7 106 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
DDX49-204ENST00000595858 MFAP4P55083 255 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 RAB11AP62491 216 aa11.51□□□□□ -0.57
DDX49-204ENST00000595858 SRSF3P84103 164 aaKnown RBP11.51□□□□□ -0.57
DDX49-204ENST00000595858 STRAPQ9Y3F4 350 aaKnown RBP11.51□□□□□ -0.57
DDX49-204ENST00000595858 PPP5D1E7EU14 171 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 BMPR1BO00238 502 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 PVALBP20472 110 aaPredicted RBP11.5□□□□□ -0.57
DDX49-204ENST00000595858 P2RY1P47900 373 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 C11orf1Q9H5F2 150 aa11.5□□□□□ -0.57
DDX49-204ENST00000595858 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
DDX49-204ENST00000595858 GPR183P32249 361 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 RAB5CP51148 216 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 SLURP1P55000 103 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 VAMP2P63027 116 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 LINC00482Q8N8I6 264 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 TXN2Q99757 166 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
DDX49-204ENST00000595858 ARL3P36405 182 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 CD69Q07108 199 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 Q56UQ5 140 aa11.49□□□□□ -0.57
DDX49-204ENST00000595858 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
DDX49-204ENST00000595858 MLXQ9UH92 298 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms