RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 TNFRSF9Q07011 255 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 FAM24BQ8N5W8 94 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 STPG3Q8N7X2 389 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 LINC00476Q8WZB0 136 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 RBKSQ9H477 322 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 HSPB7Q9UBY9 170 aa13.13□□□□□ -0.31
PNKP-206ENST00000595792 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
PNKP-206ENST00000595792 RND2P52198 227 aa13.12□□□□□ -0.31
PNKP-206ENST00000595792 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
PNKP-206ENST00000595792 LGI3Q8N145 548 aa13.12□□□□□ -0.31
PNKP-206ENST00000595792 RNF183Q96D59 192 aa13.12□□□□□ -0.31
PNKP-206ENST00000595792 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
PNKP-206ENST00000595792 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 UBE2CO00762 179 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 PITX3O75364 302 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 NPY1RP25929 384 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 CRYBB3P26998 211 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 CCR6P51684 374 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 RBMS2Q15434 407 aaKnown RBP13.11□□□□□ -0.31
PNKP-206ENST00000595792 BAK1Q16611 211 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
PNKP-206ENST00000595792 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
PNKP-206ENST00000595792 TMEM128Q5BJH2 165 aa13.1□□□□□ -0.31
PNKP-206ENST00000595792 NPIPB3Q92617 1050 aa13.1□□□□□ -0.31
PNKP-206ENST00000595792 CACFD1Q9UGQ2 172 aa13.1□□□□□ -0.31
PNKP-206ENST00000595792 U3KQE9 123 aa13.1□□□□□ -0.31
PNKP-206ENST00000595792 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 LY6G6CO95867 125 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 NPPCP23582 126 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
PNKP-206ENST00000595792 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 SLC25A4P12235 298 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 ANXA3P12429 323 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 OR10J1P30954 320 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
PNKP-206ENST00000595792 LRTM2Q8N967 370 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
PNKP-206ENST00000595792 SLC25A21Q9BQT8 299 aaPredicted RBP13.08□□□□□ -0.32
PNKP-206ENST00000595792 SFT2D2O95562 160 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 IFNA10P01566 189 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 VAMP1P23763 118 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 P2RY1P47900 373 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 DEFB131AP59861 70 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
PNKP-206ENST00000595792 SRPXP78539 464 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 CEMP1Q6PRD7 247 aaPredicted RBP13.07□□□□□ -0.32
PNKP-206ENST00000595792 OR1S1Q8NH92 325 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 ACY3Q96HD9 319 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 METTL26Q96S19 204 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 U3KQ87 197 aa13.07□□□□□ -0.32
PNKP-206ENST00000595792 DUXBA0A1W2PPF3 345 aa13.06□□□□□ -0.32
PNKP-206ENST00000595792 K7EQG2 157 aa13.06□□□□□ -0.32
PNKP-206ENST00000595792 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
PNKP-206ENST00000595792 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
PNKP-206ENST00000595792 IGKV1D-37A0A075B6S9 117 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 MPTX1A8MV57 137 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
PNKP-206ENST00000595792 CD5P06127 495 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 IAPPP10997 89 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 BTCP35070 178 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
PNKP-206ENST00000595792 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 C16orf54Q6UWD8 224 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 CENPSQ8N2Z9 138 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 GLMPQ8WWB7 406 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
PNKP-206ENST00000595792 A0A1W2PS18 150 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 TOMM40O96008 361 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 HOXB5P09067 269 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 SLC25A6P12236 298 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 CMC4P56277 68 aaPredicted RBP13.04□□□□□ -0.32
PNKP-206ENST00000595792 GAMTQ14353 236 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 ETFRF1Q6IPR1 90 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 STXBP6Q8NFX7 210 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 Q8WTZ3 238 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
PNKP-206ENST00000595792 LINC00854A0A1B0GVQ3 168 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 DEFB4AO15263 64 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 NDUFB6O95139 128 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
PNKP-206ENST00000595792 IL4P05112 153 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 HNRNPCP07910 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
PNKP-206ENST00000595792 PSG1P11464 419 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 INPP1P49441 399 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 GGNBP1Q5YKI7 109 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 NOXA1Q86UR1 476 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
PNKP-206ENST00000595792 RARRES2Q99969 163 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms