RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 PRSS54Q6PEW0 395 aa18.74■□□□□ 0.59
ZNF558-203ENST00000595786 LGI3Q8N145 548 aa18.74■□□□□ 0.59
ZNF558-203ENST00000595786 OR1S2Q8NGQ3 325 aa18.74■□□□□ 0.59
ZNF558-203ENST00000595786 NARS2Q96I59 477 aaKnown RBP18.74■□□□□ 0.59
ZNF558-203ENST00000595786 CSTL1Q9H114 145 aa18.74■□□□□ 0.59
ZNF558-203ENST00000595786 U3KQ87 197 aa18.74■□□□□ 0.59
ZNF558-203ENST00000595786 JTBO76095 146 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 NPY1RP25929 384 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 ATP5IP56385 69 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-203ENST00000595786 YPEL3P61236 119 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-203ENST00000595786 SMCO1Q147U7 214 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 Q8WTZ3 238 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 TRIM63Q969Q1 353 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 HSPB7Q9UBY9 170 aa18.73■□□□□ 0.59
ZNF558-203ENST00000595786 IGLC1P0CG04 106 aa18.72■□□□□ 0.59
ZNF558-203ENST00000595786 S100A5P33763 92 aa18.72■□□□□ 0.59
ZNF558-203ENST00000595786 TIGITQ495A1 244 aa18.72■□□□□ 0.59
ZNF558-203ENST00000595786 PYDC2Q56P42 97 aa18.72■□□□□ 0.59
ZNF558-203ENST00000595786 TOMM5Q8N4H5 51 aa18.72■□□□□ 0.59
ZNF558-203ENST00000595786 DUXBA0A1W2PPF3 345 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 MPTX1A8MV57 137 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 RPL11P62913 178 aaKnown RBP18.71■□□□□ 0.59
ZNF558-203ENST00000595786 LYZL2Q7Z4W2 148 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 LYG2Q86SG7 212 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 GATAD1Q8WUU5 269 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 TMEM170AQ8WVE7 144 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 GRAMD2BQ96HH9 432 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 SLC25A21Q9BQT8 299 aaPredicted RBP18.71■□□□□ 0.59
ZNF558-203ENST00000595786 V9GYH0 126 aa18.71■□□□□ 0.59
ZNF558-203ENST00000595786 DNAH1Q9P2D7 4330 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 IGHV3-66A0A0C4DH42 116 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 A0A0J9YWU9 116 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 OR10J1P30954 320 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 RND2P52198 227 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 TMEM128Q5BJH2 165 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 PRR13Q9NZ81 148 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 U3KQE9 123 aa18.7■□□□□ 0.58
ZNF558-203ENST00000595786 CCDC160A6NGH7 325 aa18.69■□□□□ 0.58
ZNF558-203ENST00000595786 ZNF701M0R085 212 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-203ENST00000595786 P2RY1P47900 373 aa18.69■□□□□ 0.58
ZNF558-203ENST00000595786 EIF2B2P49770 351 aaKnown RBP18.69■□□□□ 0.58
ZNF558-203ENST00000595786 ZNF124Q15973 351 aa18.69■□□□□ 0.58
ZNF558-203ENST00000595786 TMEM217Q8N7C4 229 aa18.69■□□□□ 0.58
ZNF558-203ENST00000595786 IFNA10P01566 189 aa18.68■□□□□ 0.58
ZNF558-203ENST00000595786 CCDC190Q86UF4 302 aa18.68■□□□□ 0.58
ZNF558-203ENST00000595786 DTD1Q8TEA8 209 aa18.68■□□□□ 0.58
ZNF558-203ENST00000595786 K7EQG2 157 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 HNRNPCP07910 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
ZNF558-203ENST00000595786 AP2S1P53680 142 aaPredicted RBP18.67■□□□□ 0.58
ZNF558-203ENST00000595786 DEFB131AP59861 70 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 ZNF79Q15937 498 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 LRTM2Q8N967 370 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 NPIPB3Q92617 1050 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 RBKSQ9H477 322 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 RABAC1Q9UI14 185 aa18.67■□□□□ 0.58
ZNF558-203ENST00000595786 HELTA6NFD8 242 aa18.66■□□□□ 0.58
ZNF558-203ENST00000595786 NXPH3O95157 252 aa18.66■□□□□ 0.58
ZNF558-203ENST00000595786 SLC25A6P12236 298 aa18.66■□□□□ 0.58
ZNF558-203ENST00000595786 RBM38Q9H0Z9 239 aaKnown RBP18.66■□□□□ 0.58
ZNF558-203ENST00000595786 GPX4P36969 197 aaPredicted RBP18.65■□□□□ 0.58
ZNF558-203ENST00000595786 RBMS2Q15434 407 aaKnown RBP18.65■□□□□ 0.58
ZNF558-203ENST00000595786 TMED4Q7Z7H5 227 aa18.65■□□□□ 0.58
ZNF558-203ENST00000595786 OR1S1Q8NH92 325 aa18.65■□□□□ 0.58
ZNF558-203ENST00000595786 PITX3O75364 302 aa18.64■□□□□ 0.57
ZNF558-203ENST00000595786 TOMM40O96008 361 aa18.64■□□□□ 0.57
ZNF558-203ENST00000595786 RD3LP0DJH9 198 aa18.64■□□□□ 0.57
ZNF558-203ENST00000595786 C16orf54Q6UWD8 224 aa18.64■□□□□ 0.57
ZNF558-203ENST00000595786 STXBP6Q8NFX7 210 aa18.64■□□□□ 0.57
ZNF558-203ENST00000595786 CXorf65A6NEN9 183 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 NUPR2A6NF83 97 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 FAM90A26D6RGX4 464 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 SPANXN2Q5MJ10 180 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 FAM24BQ8N5W8 94 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 DCANP1Q8TF63 244 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 ACY3Q96HD9 319 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 RARRES2Q99969 163 aa18.63■□□□□ 0.57
ZNF558-203ENST00000595786 IFNA4P05014 189 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 IL4P05112 153 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 TMEM41BQ5BJD5 291 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 LEMD1Q68G75 181 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 STHQ8IWL8 128 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 GLMPQ8WWB7 406 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 SEPSECSQ9HD40 501 aaKnown RBP18.62■□□□□ 0.57
ZNF558-203ENST00000595786 TMED3Q9Y3Q3 217 aa18.62■□□□□ 0.57
ZNF558-203ENST00000595786 VAMP1P23763 118 aa18.61■□□□□ 0.57
ZNF558-203ENST00000595786 EWSR1Q01844 656 aaKnown RBP eCLIP18.61■□□□□ 0.57
ZNF558-203ENST00000595786 USF2Q15853 346 aaPredicted RBP18.61■□□□□ 0.57
ZNF558-203ENST00000595786 MED6O75586 246 aa18.6■□□□□ 0.57
ZNF558-203ENST00000595786 SFT2D2O95562 160 aa18.6■□□□□ 0.57
ZNF558-203ENST00000595786 CA1P00915 261 aaPredicted RBP18.6■□□□□ 0.57
ZNF558-203ENST00000595786 UBE2MP61081 183 aaKnown RBP18.6■□□□□ 0.57
ZNF558-203ENST00000595786 CEMP1Q6PRD7 247 aaPredicted RBP18.6■□□□□ 0.57
ZNF558-203ENST00000595786 PFDN2Q9UHV9 154 aa18.6■□□□□ 0.57
ZNF558-203ENST00000595786 BUB3O43684 328 aa18.59■□□□□ 0.57
ZNF558-203ENST00000595786 PSG1P11464 419 aa18.59■□□□□ 0.57
ZNF558-203ENST00000595786 NUP62P37198 522 aaPredicted RBP18.59■□□□□ 0.57
ZNF558-203ENST00000595786 RAB11AP62491 216 aa18.59■□□□□ 0.57
ZNF558-203ENST00000595786 MORN3Q6PF18 240 aaPredicted RBP18.59■□□□□ 0.57
ZNF558-203ENST00000595786 CENPSQ8N2Z9 138 aa18.59■□□□□ 0.57
ZNF558-203ENST00000595786 OR51G1Q8NGK1 321 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms