RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
TRIM28-205ENST00000595028 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
TRIM28-205ENST00000595028 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
TRIM28-205ENST00000595028 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
TRIM28-205ENST00000595028 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
TRIM28-205ENST00000595028 TRAV30A0A087WSZ9 112 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 PITX3O75364 302 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 NDUFB6O95139 128 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 IFNA10P01566 189 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 IGLC1P0CG04 106 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 IL7P13232 177 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 TIGITQ495A1 244 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 U3KQ87 197 aa11.24□□□□□ -0.61
TRIM28-205ENST00000595028 RYR1P21817 5038 aa11.23□□□□□ -0.61
TRIM28-205ENST00000595028 LOC102724200A0A096LPH7 203 aaPredicted RBP11.23□□□□□ -0.61
TRIM28-205ENST00000595028 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
TRIM28-205ENST00000595028 SLC25A6P12236 298 aa11.23□□□□□ -0.61
TRIM28-205ENST00000595028 BTCP35070 178 aa11.23□□□□□ -0.61
TRIM28-205ENST00000595028 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
TRIM28-205ENST00000595028 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
TRIM28-205ENST00000595028 C7orf50Q9BRJ6 194 aaKnown RBP11.23□□□□□ -0.61
TRIM28-205ENST00000595028 LINC00854A0A1B0GVQ3 168 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 FAM90A26D6RGX4 464 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 CD5P06127 495 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 LYL1P12980 280 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 OR10J1P30954 320 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 TCF24Q7RTU0 167 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 METTL26Q96S19 204 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
TRIM28-205ENST00000595028 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 IGHV3-66A0A0C4DH42 116 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 C9orf170A2RU37 121 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 CENPXA8MT69 81 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 TFPI2P48307 235 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
TRIM28-205ENST00000595028 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.61
TRIM28-205ENST00000595028 A0A1W2PS18 150 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 DFFBO76075 338 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 IFNA4P05014 189 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 HOXB5P09067 269 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 IAPPP10997 89 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 NPPCP23582 126 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 CRYBB3P26998 211 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 YPEL3P61236 119 aaPredicted RBP11.2□□□□□ -0.62
TRIM28-205ENST00000595028 DHRS2Q13268 280 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 GGNBP1Q5YKI7 109 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 NPIPB3Q92617 1050 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
TRIM28-205ENST00000595028 PLECQ15149 4684 aaKnown RBP11.2□□□□□ -0.62
TRIM28-205ENST00000595028 A6NHS1 94 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 MED6O75586 246 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 APOC4P55056 127 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 PAFAH1B2P68402 229 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 LYG2Q86SG7 212 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 Q8WTZ3 238 aa11.19□□□□□ -0.62
TRIM28-205ENST00000595028 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 ADAP1O75689 374 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 TOMM40O96008 361 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 OR4E1P0C645 316 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
TRIM28-205ENST00000595028 P2RY1P47900 373 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
TRIM28-205ENST00000595028 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 COQ8AQ8NI60 647 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 NARS2Q96I59 477 aaKnown RBP11.18□□□□□ -0.62
TRIM28-205ENST00000595028 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
TRIM28-205ENST00000595028 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 U3KQE9 123 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 FRAS1Q86XX4 4008 aa11.18□□□□□ -0.62
TRIM28-205ENST00000595028 PLA2G10O15496 165 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 LYRM1O43325 122 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 SYNGR2O43760 224 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 IL4P05112 153 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM28-205ENST00000595028 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
TRIM28-205ENST00000595028 RAB11AP62491 216 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 RPL11P62913 178 aaKnown RBP11.17□□□□□ -0.62
TRIM28-205ENST00000595028 USF2Q15853 346 aaPredicted RBP11.17□□□□□ -0.62
TRIM28-205ENST00000595028 ZNF124Q15973 351 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 C4orf46Q504U0 113 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 GRAMD2BQ96HH9 432 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 MAGT1Q9H0U3 335 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
TRIM28-205ENST00000595028 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 DNASE2O00115 360 aaPredicted RBP11.16□□□□□ -0.62
TRIM28-205ENST00000595028 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 PSG1P11464 419 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
TRIM28-205ENST00000595028 GAMTQ14353 236 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 CNPY1Q3B7I2 92 aa11.16□□□□□ -0.62
TRIM28-205ENST00000595028 ZFAND6Q6FIF0 208 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms