RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 I3L521 148 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
USE1-204ENST00000594399 TGOLN2O43493 480 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 CXCL2P19875 107 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 ARL3P36405 182 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 RUNX1Q01196 453 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 HIST2H2BDQ6DRA6 164 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 C18orf65Q6ZTR6 163 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 TMEM144Q7Z5S9 345 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 NPVFQ9HCQ7 196 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 KANTRA0A1W2PQU2 76 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 ZFP92A6NM28 416 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 PPP5D1E7EU14 171 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 BOLA2-SMG1P6H3BVE0 249 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 TRBV12-3P01733 135 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 OR10J1P30954 320 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 NKX2-5P52952 324 aaPredicted RBP8.37□□□□□ -1.07
USE1-204ENST00000594399 ZNF266Q14584 549 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 SPSB3Q6PJ21 355 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 TEPPQ6URK8 271 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 THAP8Q8NA92 274 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 ARPC5LQ9BPX5 153 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 ZNF747Q9BV97 191 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 ARL6Q9H0F7 186 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 PEF1Q9UBV8 284 aaKnown RBP8.37□□□□□ -1.07
USE1-204ENST00000594399 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
USE1-204ENST00000594399 IGKV1OR2-108A0A075B7D4 117 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 BORCS7-ASMTA0A0B4J1R7 106 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 BMPR1BO00238 502 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 TAAR5O14804 337 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 BCL2L11O43521 198 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 MPDU1O75352 247 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 IFNA5P01569 189 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 CLEC3BP05452 202 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 HNRNPCP07910 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
USE1-204ENST00000594399 FGF7P21781 194 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 ADMP35318 185 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 NSUN5P1Q3KNT7 163 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 TIGITQ495A1 244 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 TMUB2Q71RG4 321 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 PPP1R14BQ96C90 147 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 TRGV9Q99603 122 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 CHRDL1Q9BU40 450 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 PARD6GQ9BYG4 376 aaPredicted RBP8.36□□□□□ -1.07
USE1-204ENST00000594399 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
USE1-204ENST00000594399 LSM4Q9Y4Z0 139 aaKnown RBP8.36□□□□□ -1.07
USE1-204ENST00000594399 MGAM2Q2M2H8 2515 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 IGKV1D-37A0A075B6S9 117 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 IGHV4OR15-8A0A075B7B6 117 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 A0A087WW49 117 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 GGCTO75223 188 aaKnown RBP8.35□□□□□ -1.07
USE1-204ENST00000594399 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 HSPB1P04792 205 aaKnown RBP8.35□□□□□ -1.07
USE1-204ENST00000594399 FABP1P07148 127 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 CTSGP08311 255 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 RELQ04864 619 aaPredicted RBP8.35□□□□□ -1.07
USE1-204ENST00000594399 ZNF616Q08AN1 781 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 RAB31Q13636 194 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
USE1-204ENST00000594399 SHISA2Q6UWI4 295 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 DPF1Q92782 380 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 MGST2Q99735 147 aa8.35□□□□□ -1.07
USE1-204ENST00000594399 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
USE1-204ENST00000594399 LINC01619G3V211 115 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 AGPAT2O15120 278 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 JTBO76095 146 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 TOMM40O96008 361 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 C4BPBP20851 252 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 ZP3P21754 424 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 CAMLGP49069 296 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
USE1-204ENST00000594399 ZNF90Q03938 601 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 FHL3Q13643 280 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 RPEL1Q2QD12 228 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
USE1-204ENST00000594399 LAMTOR1Q6IAA8 161 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 ZNF600Q6ZNG1 722 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 CYP2G1PQ6ZSU1 146 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 OR11H1Q8NG94 326 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 GGTLC1Q9BX51 225 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 ZNF471Q9BX82 626 aaPredicted RBP8.34□□□□□ -1.07
USE1-204ENST00000594399 NPCDR1Q9BY65 106 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 KCNIP2Q9NS61 270 aa8.34□□□□□ -1.07
USE1-204ENST00000594399 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 CCL24O00175 119 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 OR2C1O95371 312 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 RD3LP0DJH9 198 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms