RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PSMG4Q5JS54 123 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 OR4D10Q8NGI6 311 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 OR52E5Q8NH55 327 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 MARCH1Q8TCQ1 289 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 C15orf40Q8WUR7 153 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.4■□□□□ 0.22
SSBP4-203ENST00000593641 ELOA3CA0A087WX78 387 aaPredicted RBP16.39■□□□□ 0.21
SSBP4-203ENST00000593641 RAB3DO95716 219 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 SLC25A4P12235 298 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 RND2P52198 227 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 Q6ZRM9 215 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 TMEM229BQ8NBD8 167 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
SSBP4-203ENST00000593641 U3KQE9 123 aa16.39■□□□□ 0.21
SSBP4-203ENST00000593641 CDS2O95674 445 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 CD74P04233 296 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 OR5AC1P0C628 307 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 OR10J1P30954 320 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 NUTF2P61970 127 aaKnown RBP16.38■□□□□ 0.21
SSBP4-203ENST00000593641 SNRPD3P62318 126 aaKnown RBP16.38■□□□□ 0.21
SSBP4-203ENST00000593641 AARDQ4LEZ3 155 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 STEAP1BQ6NZ63 245 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 PRSS54Q6PEW0 395 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 C16orf54Q6UWD8 224 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 CSNK1G2-AS1Q8NCQ2 148 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 SLC24A4Q8NFF2 622 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 RNASEH2CQ8TDP1 164 aaKnown RBP16.38■□□□□ 0.21
SSBP4-203ENST00000593641 GLMPQ8WWB7 406 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 RAB40CQ96S21 281 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 TMEM222Q9H0R3 208 aa16.38■□□□□ 0.21
SSBP4-203ENST00000593641 TEX13DA0A0J9YY54 714 aaPredicted RBP16.37■□□□□ 0.21
SSBP4-203ENST00000593641 ZNF182P17025 639 aaPredicted RBP16.37■□□□□ 0.21
SSBP4-203ENST00000593641 YPEL3P61236 119 aaPredicted RBP16.37■□□□□ 0.21
SSBP4-203ENST00000593641 C2orf83Q53S99 150 aa16.37■□□□□ 0.21
SSBP4-203ENST00000593641 ETFRF1Q6IPR1 90 aa16.37■□□□□ 0.21
SSBP4-203ENST00000593641 RBPMSQ93062 196 aaKnown RBP16.37■□□□□ 0.21
SSBP4-203ENST00000593641 ABHD1Q96SE0 405 aa16.37■□□□□ 0.21
SSBP4-203ENST00000593641 RNF126Q9BV68 326 aa16.37■□□□□ 0.21
SSBP4-203ENST00000593641 C1QTNF4Q9BXJ3 329 aa16.37■□□□□ 0.21
SSBP4-203ENST00000593641 CEBPZOSA8MTT3 80 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 IL4P05112 153 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 DHODHQ02127 395 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 NAA60Q9H7X0 242 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 CACNG5Q9UF02 275 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 PCLOQ9Y6V0 5065 aa16.36■□□□□ 0.21
SSBP4-203ENST00000593641 GSTZ1O43708 216 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-203ENST00000593641 MEF2DQ14814 521 aa16.35■□□□□ 0.21
SSBP4-203ENST00000593641 USF2Q15853 346 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-203ENST00000593641 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
SSBP4-203ENST00000593641 GLYATL2Q8WU03 294 aa16.35■□□□□ 0.21
SSBP4-203ENST00000593641 NRN1Q9NPD7 142 aa16.35■□□□□ 0.21
SSBP4-203ENST00000593641 DEFB131BA0A096LNP1 70 aa16.34■□□□□ 0.21
SSBP4-203ENST00000593641 FAM90A26D6RGX4 464 aa16.34■□□□□ 0.21
SSBP4-203ENST00000593641 LINC00336Q6ZUF6 198 aa16.34■□□□□ 0.21
SSBP4-203ENST00000593641 NOXA1Q86UR1 476 aa16.34■□□□□ 0.21
SSBP4-203ENST00000593641 SELENOHQ8IZQ5 122 aaKnown RBP16.34■□□□□ 0.21
SSBP4-203ENST00000593641 SEPSECSQ9HD40 501 aaKnown RBP16.34■□□□□ 0.21
SSBP4-203ENST00000593641 CELA1Q9UNI1 258 aa16.34■□□□□ 0.21
SSBP4-203ENST00000593641 FAT2Q9NYQ8 4349 aa16.33■□□□□ 0.21
SSBP4-203ENST00000593641 GABARAPH6UMI1 98 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 GABARAPO95166 117 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 AMBPP02760 352 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 NPY1RP25929 384 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 SSBP1Q04837 148 aaKnown RBP16.33■□□□□ 0.2
SSBP4-203ENST00000593641 GPR107Q5VW38 600 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 TMEM268Q5VZI3 342 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 FAAP20Q6NZ36 180 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 SIGLEC15Q6ZMC9 328 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 GPR146Q96CH1 333 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 RTBDNQ9BSG5 229 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-203ENST00000593641 XCL2Q9UBD3 114 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 CACFD1Q9UGQ2 172 aa16.33■□□□□ 0.2
SSBP4-203ENST00000593641 DISC1C4P0D8 188 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 TOMM40O96008 361 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 RD3LP0DJH9 198 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
SSBP4-203ENST00000593641 SURF2Q15527 256 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-203ENST00000593641 C12orf74Q32Q52 190 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 ZNF767PQ75MW2 155 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 NPIPB3Q92617 1050 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 ACY3Q96HD9 319 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 DNAH2Q9P225 4427 aa16.32■□□□□ 0.2
SSBP4-203ENST00000593641 BUB3O43684 328 aa16.31■□□□□ 0.2
SSBP4-203ENST00000593641 NXPH3O95157 252 aa16.31■□□□□ 0.2
SSBP4-203ENST00000593641 CTF1Q16619 201 aa16.31■□□□□ 0.2
SSBP4-203ENST00000593641 NDUFAF3Q9BU61 184 aa16.31■□□□□ 0.2
SSBP4-203ENST00000593641 NAA50Q9GZZ1 169 aaKnown RBP16.31■□□□□ 0.2
SSBP4-203ENST00000593641 PKHD1P08F94 4074 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 CRYM-AS1A6NIL9 109 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 H3BMM0 161 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 RGS5O15539 181 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 P0DMU3 169 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 FAM231AP0DMU4 169 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 FAM231CP0DMU5 169 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 NUP62P37198 522 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-203ENST00000593641 TMEM170AQ8WVE7 144 aa16.3■□□□□ 0.2
SSBP4-203ENST00000593641 IFNA10P01566 189 aa16.29■□□□□ 0.2
SSBP4-203ENST00000593641 SULT1A3P0DMM9 295 aa16.29■□□□□ 0.2
SSBP4-203ENST00000593641 SULT1A4P0DMN0 295 aa16.29■□□□□ 0.2
SSBP4-203ENST00000593641 HLA-DRB4P13762 266 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms