RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ELOA3CA0A087WX78 387 aaPredicted RBP15.69■□□□□ 0.1
CLIP3-206ENST00000593074 CRYBB3P26998 211 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 FOXL1Q12952 345 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 PLGLAQ15195 96 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 MMDQ15546 238 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 EAF1Q96JC9 268 aaPredicted RBP15.69■□□□□ 0.1
CLIP3-206ENST00000593074 HILPDAQ9Y5L2 63 aa15.69■□□□□ 0.1
CLIP3-206ENST00000593074 NDUFA3O95167 84 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 MOSP00540 346 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 CLEC12BQ2HXU8 276 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 LHFPL4Q7Z7J7 247 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 NPBQ8NG41 125 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 TACC2O95359 2948 aa15.68■□□□□ 0.1
CLIP3-206ENST00000593074 NBR2O15453 112 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 S100A9P06702 114 aaKnown RBP15.67■□□□□ 0.1
CLIP3-206ENST00000593074 ZFP36P26651 326 aaKnown RBP15.67■□□□□ 0.1
CLIP3-206ENST00000593074 SSX2Q16385 188 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 BTF3L4Q96K17 158 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 ARHGAP32A7KAX9 2087 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 OVOL3O00110 214 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 HNF1AP20823 631 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 OR10G8Q8NGN5 311 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 PAXXQ9BUH6 204 aa15.67■□□□□ 0.1
CLIP3-206ENST00000593074 HELTA6NFD8 242 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 LGALS4P56470 323 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 SUMO1P63165 101 aaKnown RBP15.66■□□□□ 0.1
CLIP3-206ENST00000593074 CENPWQ5EE01 88 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 PYYP10082 97 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 GNG4P50150 75 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 ACTL10Q5JWF8 245 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 LINC00305Q7Z4B0 112 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 VMO1Q7Z5L0 202 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 SGMS2Q8NHU3 365 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 OR51M1Q9H341 326 aa15.66■□□□□ 0.1
CLIP3-206ENST00000593074 GOSR1O95249 250 aa15.65■□□□□ 0.1
CLIP3-206ENST00000593074 HIST3H2BBQ8N257 126 aa15.65■□□□□ 0.1
CLIP3-206ENST00000593074 FXYD5Q96DB9 178 aa15.65■□□□□ 0.1
CLIP3-206ENST00000593074 PERPQ96FX8 193 aa15.65■□□□□ 0.1
CLIP3-206ENST00000593074 ACACBO00763 2458 aa15.65■□□□□ 0.1
CLIP3-206ENST00000593074 I3L2K1 104 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 PLP1P60201 277 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 IGHV3-21A0A0B4J1V1 117 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 OOSP1A8MZH6 123 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 CNIH1O95406 144 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 HOXB4P17483 251 aaPredicted RBP15.64■□□□□ 0.09
CLIP3-206ENST00000593074 PITPNC1Q9UKF7 332 aa15.64■□□□□ 0.09
CLIP3-206ENST00000593074 A0A1W2PRD5 423 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 A0A1W2PRF3 423 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 A0A1W2PRM7 423 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 PCP4L1A6NKN8 68 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 ORM2P19652 201 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 GFI1BQ5VTD9 330 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 CCDC144NLQ6NUI1 221 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 STXBP6Q8NFX7 210 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 OR1B1Q8NGR6 318 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 IGF2BP2-AS1Q96M15 143 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 BPESC1Q9GZL8 116 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 SIRPDQ9H106 197 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 GAR1Q9NY12 217 aaKnown RBP15.63■□□□□ 0.09
CLIP3-206ENST00000593074 FBLN7Q53RD9 439 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 MINOS1Q5TGZ0 78 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 IGFBPL1Q8WX77 278 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 WNT10AQ9GZT5 417 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 MINOS1-NBL1R4GNA1 71 aa15.63■□□□□ 0.09
CLIP3-206ENST00000593074 TRAV9-1A0A075B6T8 112 aa15.62■□□□□ 0.09
CLIP3-206ENST00000593074 IGLC1P0CG04 106 aa15.62■□□□□ 0.09
CLIP3-206ENST00000593074 C5orf64Q2M2E5 130 aa15.62■□□□□ 0.09
CLIP3-206ENST00000593074 IL36BQ9NZH7 164 aa15.62■□□□□ 0.09
CLIP3-206ENST00000593074 HYPMO75409 117 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 CD24P25063 80 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 RPL15P61313 204 aaKnown RBP15.61■□□□□ 0.09
CLIP3-206ENST00000593074 LMO4P61968 165 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 ZNF329Q86UD4 541 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 DYNAPQ8N1N2 210 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 IGHV2-70DA0A0C4DH43 119 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 A0A0U1RQK1 487 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 ZNF320A2RRD8 509 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 IGLV2-8P01709 118 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 S100A2P29034 98 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 MYCNOSP40205 109 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 TIGITQ495A1 244 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 OR1L6Q8NGR2 347 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 GPR61Q9BZJ8 451 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 CDC42EP3Q9UKI2 254 aa15.61■□□□□ 0.09
CLIP3-206ENST00000593074 IGHV4-39P01824 125 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 PDLIM4P50479 330 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 OR5I1Q13606 314 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 HES1Q14469 280 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 FXYD3Q14802 87 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 COA6Q5JTJ3 125 aaKnown RBP15.6■□□□□ 0.09
CLIP3-206ENST00000593074 Q8N6K4 173 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 GSX1Q9H4S2 264 aaPredicted RBP15.6■□□□□ 0.09
CLIP3-206ENST00000593074 V9GYV3 84 aa15.6■□□□□ 0.09
CLIP3-206ENST00000593074 K7EIM0 57 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 SLC17A3O00476 420 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 GCGP01275 180 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 TAS2R60P59551 318 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 ERVFC1-1P60608 527 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 EBI3Q14213 229 aa15.59■□□□□ 0.09
CLIP3-206ENST00000593074 IGSF10Q6WRI0 2623 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms