RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 LINC00476Q8WZB0 136 aa17.09■□□□□ 0.33
MBD3-211ENST00000592965 TMEM230Q96A57 120 aa17.09■□□□□ 0.33
MBD3-211ENST00000592965 SCGB3A2Q96PL1 93 aa17.09■□□□□ 0.33
MBD3-211ENST00000592965 AGRNO00468 2067 aa17.09■□□□□ 0.33
MBD3-211ENST00000592965 IGLC1P0CG04 106 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 SULT1A3P0DMM9 295 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 SULT1A4P0DMN0 295 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 P2RY1P47900 373 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 DEFB131AP59861 70 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 TMEM187Q14656 261 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 NMSQ5H8A3 153 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 PRSS54Q6PEW0 395 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 CEMP1Q6PRD7 247 aaPredicted RBP17.08■□□□□ 0.32
MBD3-211ENST00000592965 FAM24BQ8N5W8 94 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 OR1S2Q8NGQ3 325 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 TMEM170AQ8WVE7 144 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 KCNIP3Q9Y2W7 256 aa17.08■□□□□ 0.32
MBD3-211ENST00000592965 RND2P52198 227 aa17.07■□□□□ 0.32
MBD3-211ENST00000592965 NARS2Q96I59 477 aaKnown RBP17.07■□□□□ 0.32
MBD3-211ENST00000592965 RABAC1Q9UI14 185 aa17.07■□□□□ 0.32
MBD3-211ENST00000592965 K7EQG2 157 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 ZNF701M0R085 212 aaPredicted RBP17.06■□□□□ 0.32
MBD3-211ENST00000592965 NPY1RP25929 384 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 LEMD1Q68G75 181 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 NOXA1Q86UR1 476 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 GRAMD2BQ96HH9 432 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 MCUBQ9NWR8 336 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 U3KQE9 123 aa17.06■□□□□ 0.32
MBD3-211ENST00000592965 A0A0B4J2A0 478 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 FABP12A6NFH5 140 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 CA1P00915 261 aaPredicted RBP17.05■□□□□ 0.32
MBD3-211ENST00000592965 OR10J1P30954 320 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 YPEL3P61236 119 aaPredicted RBP17.05■□□□□ 0.32
MBD3-211ENST00000592965 ETFRF1Q6IPR1 90 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 STXBP6Q8NFX7 210 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 RARRES2Q99969 163 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 C11orf68Q9H3H3 251 aaKnown RBP17.05■□□□□ 0.32
MBD3-211ENST00000592965 PRR13Q9NZ81 148 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 SHPKQ9UHJ6 478 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 V9GYH0 126 aa17.05■□□□□ 0.32
MBD3-211ENST00000592965 CCR6P51684 374 aa17.04■□□□□ 0.32
MBD3-211ENST00000592965 SUPT4H1P63272 117 aaKnown RBP17.04■□□□□ 0.32
MBD3-211ENST00000592965 OR11H2Q8NH07 326 aa17.04■□□□□ 0.32
MBD3-211ENST00000592965 Q8WTZ3 238 aa17.04■□□□□ 0.32
MBD3-211ENST00000592965 HSPB7Q9UBY9 170 aa17.04■□□□□ 0.32
MBD3-211ENST00000592965 KLK5Q9Y337 293 aaPredicted RBP17.04■□□□□ 0.32
MBD3-211ENST00000592965 NXPH3O95157 252 aa17.03■□□□□ 0.32
MBD3-211ENST00000592965 SRPXP78539 464 aa17.03■□□□□ 0.32
MBD3-211ENST00000592965 SMCO1Q147U7 214 aa17.03■□□□□ 0.32
MBD3-211ENST00000592965 RBMS2Q15434 407 aaKnown RBP17.03■□□□□ 0.32
MBD3-211ENST00000592965 ZNF79Q15937 498 aa17.03■□□□□ 0.32
MBD3-211ENST00000592965 DCANP1Q8TF63 244 aa17.03■□□□□ 0.32
MBD3-211ENST00000592965 HELTA6NFD8 242 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
MBD3-211ENST00000592965 AKR1C4P17516 323 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 EIF2B2P49770 351 aaKnown RBP17.02■□□□□ 0.32
MBD3-211ENST00000592965 LYZL2Q7Z4W2 148 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 STHQ8IWL8 128 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 TRIM63Q969Q1 353 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 U3KQ87 197 aa17.02■□□□□ 0.32
MBD3-211ENST00000592965 ANXA3P12429 323 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 FAUP35544 74 aaKnown RBP17.01■□□□□ 0.31
MBD3-211ENST00000592965 KLF9Q13886 244 aaPredicted RBP17.01■□□□□ 0.31
MBD3-211ENST00000592965 C16orf54Q6UWD8 224 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 TRPT1Q86TN4 253 aaKnown RBP17.01■□□□□ 0.31
MBD3-211ENST00000592965 CCDC190Q86UF4 302 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 LGI3Q8N145 548 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 GLMPQ8WWB7 406 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 NPIPB3Q92617 1050 aa17.01■□□□□ 0.31
MBD3-211ENST00000592965 PIGBOS1A0A0B4J2F0 54 aa17■□□□□ 0.31
MBD3-211ENST00000592965 IFNA10P01566 189 aa17■□□□□ 0.31
MBD3-211ENST00000592965 ZNF688P0C7X2 276 aa17■□□□□ 0.31
MBD3-211ENST00000592965 DTD1Q8TEA8 209 aa17■□□□□ 0.31
MBD3-211ENST00000592965 PHLDA1Q8WV24 401 aaPredicted RBP17■□□□□ 0.31
MBD3-211ENST00000592965 ACY3Q96HD9 319 aa17■□□□□ 0.31
MBD3-211ENST00000592965 LY6G6CO95867 125 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 TOMM40O96008 361 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 IL4P05112 153 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 ATP5IP56385 69 aaPredicted RBP16.99■□□□□ 0.31
MBD3-211ENST00000592965 USF2Q15853 346 aaPredicted RBP16.99■□□□□ 0.31
MBD3-211ENST00000592965 TMEM41BQ5BJD5 291 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 MFFQ9GZY8 342 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 RBKSQ9H477 322 aa16.99■□□□□ 0.31
MBD3-211ENST00000592965 KMT2AQ03164 3969 aa16.98■□□□□ 0.31
MBD3-211ENST00000592965 GIG44P09565 113 aaPredicted RBP16.98■□□□□ 0.31
MBD3-211ENST00000592965 RD3LP0DJH9 198 aa16.98■□□□□ 0.31
MBD3-211ENST00000592965 SPP1P10451 314 aa16.98■□□□□ 0.31
MBD3-211ENST00000592965 AP2S1P53680 142 aaPredicted RBP16.98■□□□□ 0.31
MBD3-211ENST00000592965 AP3S2P59780 193 aa16.98■□□□□ 0.31
MBD3-211ENST00000592965 MORN3Q6PF18 240 aaPredicted RBP16.98■□□□□ 0.31
MBD3-211ENST00000592965 DUXBA0A1W2PPF3 345 aa16.97■□□□□ 0.31
MBD3-211ENST00000592965 DHRS2Q13268 280 aa16.97■□□□□ 0.31
MBD3-211ENST00000592965 PYDC2Q56P42 97 aa16.97■□□□□ 0.31
MBD3-211ENST00000592965 C11orf45Q8TAV5 145 aa16.97■□□□□ 0.31
MBD3-211ENST00000592965 KNCNA6PVL3 124 aa16.96■□□□□ 0.31
MBD3-211ENST00000592965 TMEM128Q5BJH2 165 aa16.96■□□□□ 0.31
MBD3-211ENST00000592965 TMED4Q7Z7H5 227 aa16.96■□□□□ 0.31
MBD3-211ENST00000592965 OR1S1Q8NH92 325 aa16.96■□□□□ 0.31
MBD3-211ENST00000592965 DEDD2Q8WXF8 326 aa16.96■□□□□ 0.31
MBD3-211ENST00000592965 NDUFA13Q9P0J0 144 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms