RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
APOC1-208ENST00000592535 WFDC3Q8IUB2 231 aa10.26□□□□□ -0.77
APOC1-208ENST00000592535 HSPB7Q9UBY9 170 aa10.26□□□□□ -0.77
APOC1-208ENST00000592535 TENM2Q9NT68 2774 aa10.26□□□□□ -0.77
APOC1-208ENST00000592535 STARD9Q9P2P6 4700 aa10.26□□□□□ -0.77
APOC1-208ENST00000592535 KIR2DL5BA0A0G2JN68 375 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 KIR2DL5BA0A0G2JPC4 375 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 LCE6AA0A183 80 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 SPRY2O43597 315 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 UPK1BO75841 260 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 CD5P06127 495 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 SLC25A4P12235 298 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 IL7P13232 177 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 NPPCP23582 126 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 CMC4P56277 68 aaPredicted RBP10.25□□□□□ -0.77
APOC1-208ENST00000592535 PAFAH1B2P68402 229 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 TMEM128Q5BJH2 165 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 Q6ZWC4 215 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 KIR2DL5AQ8N109 375 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 OR1S2Q8NGQ3 325 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 METTL26Q96S19 204 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 RBKSQ9H477 322 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 TMEM231Q9H6L2 316 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 CACFD1Q9UGQ2 172 aa10.25□□□□□ -0.77
APOC1-208ENST00000592535 A0A1W2PS18 150 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 UBE2CO00762 179 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 IFNA10P01566 189 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 CRYBB3P26998 211 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 OR10J1P30954 320 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
APOC1-208ENST00000592535 RBMS2Q15434 407 aaKnown RBP10.24□□□□□ -0.77
APOC1-208ENST00000592535 ETFRF1Q6IPR1 90 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 OR1S1Q8NH92 325 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 DTD1Q8TEA8 209 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
APOC1-208ENST00000592535 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
APOC1-208ENST00000592535 VAMP1P23763 118 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 P2RY1P47900 373 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
APOC1-208ENST00000592535 NOXA1Q86UR1 476 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 DEDD2Q8WXF8 326 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 NPIPB3Q92617 1050 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 RNF183Q96D59 192 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 ACY3Q96HD9 319 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 SLC25A21Q9BQT8 299 aaPredicted RBP10.23□□□□□ -0.77
APOC1-208ENST00000592535 RABAC1Q9UI14 185 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 U3KQ87 197 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 SACSQ9NZJ4 4579 aa10.23□□□□□ -0.77
APOC1-208ENST00000592535 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 DUXBA0A1W2PPF3 345 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 PLA2G10O15496 165 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 PITX3O75364 302 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 SFT2D2O95562 160 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 DEFB131AP59861 70 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 PPP1R1AQ13522 171 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 LRTM2Q8N967 370 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 STXBP6Q8NFX7 210 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 Q8WTZ3 238 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 U3KQE9 123 aa10.22□□□□□ -0.77
APOC1-208ENST00000592535 AGRNO00468 2067 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 PIGBOS1A0A0B4J2F0 54 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 K7EQG2 157 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 IFNA4P05014 189 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 IL4P05112 153 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 HNRNPCP07910 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
APOC1-208ENST00000592535 EWSR1Q01844 656 aaKnown RBP eCLIP10.21□□□□□ -0.77
APOC1-208ENST00000592535 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.77
APOC1-208ENST00000592535 LYG2Q86SG7 212 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 CENPSQ8N2Z9 138 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 GRAMD2BQ96HH9 432 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 NARS2Q96I59 477 aaKnown RBP10.21□□□□□ -0.77
APOC1-208ENST00000592535 CSTL1Q9H114 145 aa10.21□□□□□ -0.77
APOC1-208ENST00000592535 RYR2Q92736 4967 aa10.21□□□□□ -0.78
APOC1-208ENST00000592535 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 TOMM40O96008 361 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 IAPPP10997 89 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 INPP1P49441 399 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 TRIQKQ629K1 86 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 TBC1D24Q9ULP9 559 aa10.2□□□□□ -0.78
APOC1-208ENST00000592535 HOXB5P09067 269 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 RD3LP0DJH9 198 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 SLC25A6P12236 298 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 ATP5IP56385 69 aaPredicted RBP10.19□□□□□ -0.78
APOC1-208ENST00000592535 ASAH1Q13510 395 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 C16orf54Q6UWD8 224 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 DCANP1Q8TF63 244 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 GLMPQ8WWB7 406 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 TMED3Q9Y3Q3 217 aa10.19□□□□□ -0.78
APOC1-208ENST00000592535 LINC00854A0A1B0GVQ3 168 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 NAP1L6A6NFF2 107 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms