RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 OR10C1Q96KK4 312 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 BATF3Q9NR55 127 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 NUDT15Q9NV35 164 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 TRAV25A0A0B4J276 109 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 IGHV3-66A0A0C4DH42 116 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 FAM240BA0A1B0GVZ2 78 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 MPTX1A8MV57 137 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 WRBO00258 174 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 LAMTOR1Q6IAA8 161 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 NPIPB3Q92617 1050 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 ZMAT4Q9H898 229 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 SMPXQ9UHP9 88 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 TBC1D24Q9ULP9 559 aa10.44□□□□□ -0.74
CLIP3-205ENST00000592017 SACSQ9NZJ4 4579 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 CHEK1O14757 476 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 SYNGR2O43760 224 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 IGLC1P0CG04 106 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 OR10J1P30954 320 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 HAGHQ16775 308 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 OR1S2Q8NGQ3 325 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 CIB3Q96Q77 187 aaPredicted RBP10.43□□□□□ -0.74
CLIP3-205ENST00000592017 RNF2Q99496 336 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
CLIP3-205ENST00000592017 SEC22CQ9BRL7 303 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
CLIP3-205ENST00000592017 C3orf84H3BNL1 204 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 H3BP45 60 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 TSPAN4O14817 238 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 UPK1BO75841 260 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 H2AFB2P0C5Z0 115 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 BMI1P35226 326 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
CLIP3-205ENST00000592017 TFPI2P48307 235 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 RAB11AP62491 216 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 ASAH1Q13510 395 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 SPANXN5Q5MJ07 72 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 MUC7Q8TAX7 377 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 MITD1Q8WV92 249 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 ST8SIA2Q92186 375 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 SLC35E1Q96K37 410 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 UBQLN2Q9UHD9 624 aa10.42□□□□□ -0.74
CLIP3-205ENST00000592017 RYR2Q92736 4967 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 CCSO14618 274 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 SSSCA1O60232 199 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 APOHP02749 345 aaPredicted RBP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 NPPCP23582 126 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 ATP5IP56385 69 aaPredicted RBP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 POLR2GP62487 172 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 RPP30P78346 268 aaKnown RBP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 IAH1Q2TAA2 248 aaPredicted RBP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 LINC00322Q6ZN03 302 aaPredicted RBP10.41□□□□□ -0.74
CLIP3-205ENST00000592017 ENKURQ8TC29 256 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 METTL26Q96S19 204 aa10.41□□□□□ -0.74
CLIP3-205ENST00000592017 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 TCF24Q7RTU0 167 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 GBGT1Q8N5D6 347 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 OR4D5Q8NGN0 318 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 ZNF431Q8TF32 576 aaPredicted RBP10.4□□□□□ -0.74
CLIP3-205ENST00000592017 Q8WTZ3 238 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 NARS2Q96I59 477 aaKnown RBP10.4□□□□□ -0.74
CLIP3-205ENST00000592017 CITED4Q96RK1 184 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 GSKIPQ9P0R6 139 aa10.4□□□□□ -0.74
CLIP3-205ENST00000592017 RBMY1BA6NDE4 496 aaKnown RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 RBMY1EA6NEQ0 496 aaKnown RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 IL4P05112 153 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 RBMY1DP0C7P1 496 aaKnown RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 GPX4P36969 197 aaPredicted RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 GAMTQ14353 236 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 CASC10Q5T4H9 136 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 TMEM231Q9H6L2 316 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
CLIP3-205ENST00000592017 STRAPQ9Y3F4 350 aaKnown RBP10.39□□□□□ -0.75
CLIP3-205ENST00000592017 TENM2Q9NT68 2774 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 A0A1W2PS18 150 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 DFFBO76075 338 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 TOMM40O96008 361 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 IFITM3Q01628 133 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 ID3Q02535 119 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 WFDC3Q8IUB2 231 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 LILRB2Q8N423 598 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 C12orf45Q8N5I9 185 aaPredicted RBP10.38□□□□□ -0.75
CLIP3-205ENST00000592017 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms