RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MBD3L5A6NJ08 208 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 MBD3L2Q8NHZ7 208 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 C2orf88Q9BSF0 95 aa14.01□□□□□ -0.17
SMARCA4-215ENST00000590574 C15orf65H3BRN8 121 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 PRB4P10163 310 aaPredicted RBP14□□□□□ -0.17
SMARCA4-215ENST00000590574 CX3CL1P78423 397 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 KHDC1LQ5JSQ8 128 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 PPP1R27Q86WC6 154 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 LYNX1G3V0Z9 82 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 MGPP08493 103 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 LYNX1P0DP58 116 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 RPS20P60866 119 aaKnown RBP14□□□□□ -0.17
SMARCA4-215ENST00000590574 SLC25A48Q6ZT89 311 aaKnown RBP14□□□□□ -0.17
SMARCA4-215ENST00000590574 PTPRSQ13332 1948 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 TMEM136Q6ZRR5 245 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 DPM3Q9P2X0 92 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 RNASE2P10153 161 aaKnown RBP14□□□□□ -0.17
SMARCA4-215ENST00000590574 MAP1LC3AQ9H492 121 aa14□□□□□ -0.17
SMARCA4-215ENST00000590574 DIDO1Q9BTC0 2240 aaKnown RBP14□□□□□ -0.17
SMARCA4-215ENST00000590574 TFPI2P48307 235 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 CEP250Q9BV73 2442 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 TMEM14BQ9NUH8 114 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 PET117Q6UWS5 81 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 NIT1Q86X76 327 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 EREGO14944 169 aa13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 RPL24P83731 157 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-215ENST00000590574 SNAI2O43623 268 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 TYMSP04818 313 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 ZNF134P52741 427 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 COTL1Q14019 142 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 ST6GALNAC3Q8NDV1 305 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 TMEM167AQ8TBQ9 72 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 METTL26Q96S19 204 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 POLR3KQ9Y2Y1 108 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 PRELID3AQ96N28 172 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 TRAV9-2A0A087WT02 112 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 GAGE10A6NGK3 116 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 C8orf46Q8TAG6 207 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 SAPCD1Q5SSQ6 148 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 ZNF841Q6ZN19 808 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 C16orf92Q96LL3 132 aa13.98□□□□□ -0.17
SMARCA4-215ENST00000590574 FAM169BQ8N8A8 192 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 RNASE6Q93091 150 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 TMEM178BH3BS89 294 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 ZNF124Q15973 351 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 HEATR1Q9H583 2144 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 NUP210LQ5VU65 1888 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 IGHV3OR16-8A0A075B7F1 116 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 FNDC10F2Z333 226 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 WNT2P09544 360 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 CD24P25063 80 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 NUP35Q8NFH5 326 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 C11orf1Q9H5F2 150 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 NUDT3O95989 172 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 C17orf58Q2M2W7 97 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 PMCHL2Q9BQD1 86 aa13.97□□□□□ -0.17
SMARCA4-215ENST00000590574 ITGB1BP1O14713 200 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 Q6ZPA2 131 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 RAB37Q96AX2 223 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 F11RQ9Y624 299 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 IGHV3OR16-13A0A075B7E8 117 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 IGHV3-74A0A0B4J1X5 117 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 FAM181BA6NEQ2 426 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 IGHV1-8P0DP01 117 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 ATP5L2Q7Z4Y8 100 aa13.96□□□□□ -0.17
SMARCA4-215ENST00000590574 LINC00614P0C842 121 aa13.96□□□□□ -0.18
SMARCA4-215ENST00000590574 CDKN1AP38936 164 aa13.96□□□□□ -0.18
SMARCA4-215ENST00000590574 PRSS8Q16651 343 aa13.96□□□□□ -0.18
SMARCA4-215ENST00000590574 C11orf53Q8IXP5 236 aa13.96□□□□□ -0.18
SMARCA4-215ENST00000590574 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.18
SMARCA4-215ENST00000590574 GPX1P07203 203 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 CENPVQ7Z7K6 275 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 CIARTQ8N365 385 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 IGHV3-66A0A0C4DH42 116 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 NBR2O15453 112 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 ZNF329Q86UD4 541 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 NCOA6Q14686 2063 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 ERASQ7Z444 233 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 NUP37Q8NFH4 326 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
SMARCA4-215ENST00000590574 EP300Q09472 2414 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 IGHV2-26A0A0B4J1V2 119 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 M0QZ24 198 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 RPRMLQ8N4K4 120 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 NEUROG1Q92886 237 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 LOXL3P58215 753 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 LCN12Q6JVE5 192 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 EXOC3-AS1Q8N2X6 119 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 SCRT1Q9BWW7 348 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 LYPD2Q6UXB3 125 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 FBXL7Q9UJT9 491 aa13.94□□□□□ -0.18
SMARCA4-215ENST00000590574 PCNTO95613 3336 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 287.3 ms