RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 ANKRD20A5PA0PJZ0 165 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 CENPXA8MT69 81 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-209ENST00000589949 LYRM1O43325 122 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 ATG12O94817 140 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
H3F3B-209ENST00000589949 NPPCP23582 126 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 CRYBB3P26998 211 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 OPRK1P41145 380 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.317e-15■■■■□ 24.9
H3F3B-209ENST00000589949 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 MEF2DQ14814 521 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 OXA1LQ15070 435 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 SELENOHQ8IZQ5 122 aaKnown RBP13.14□□□□□ -0.31
H3F3B-209ENST00000589949 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 AGRNO00468 2067 aa13.14□□□□□ -0.31
H3F3B-209ENST00000589949 FRAS1Q86XX4 4008 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 TEX13DA0A0J9YY54 714 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-209ENST00000589949 K7EQG2 157 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 CORTO00230 105 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 CD5P06127 495 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 SPCS3P61009 180 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 RBMS2Q15434 407 aaKnown RBP13.13□□□□□ -0.31
H3F3B-209ENST00000589949 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 OR4C16Q8NGL9 310 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
H3F3B-209ENST00000589949 NAA60Q9H7X0 242 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 CACNG5Q9UF02 275 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
H3F3B-209ENST00000589949 U3KQE9 123 aa13.13□□□□□ -0.31
H3F3B-209ENST00000589949 NAP1L6A6NFF2 107 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 DEDDO75618 318 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 P2RY1P47900 373 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 PRSS54Q6PEW0 395 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
H3F3B-209ENST00000589949 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
H3F3B-209ENST00000589949 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-209ENST00000589949 GPR132Q9UNW8 380 aa13.12□□□□□ -0.31
H3F3B-209ENST00000589949 CRYM-AS1A6NIL9 109 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 B3GALNT1O75752 331 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 NXPH3O95157 252 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 IGLC1P0CG04 106 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
H3F3B-209ENST00000589949 FAM219AQ8IW50 185 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 METTL26Q96S19 204 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 FBXL17Q9UF56 701 aa13.11□□□□□ -0.31
H3F3B-209ENST00000589949 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 FAUP35544 74 aaKnown RBP13.1□□□□□ -0.31
H3F3B-209ENST00000589949 HTR2BP41595 481 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 RND2P52198 227 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM187Q14656 261 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 Q6ZNX1 250 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 NRARPQ7Z6K4 114 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 Q8NAQ8 132 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 OR51S1Q8NGJ8 323 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
H3F3B-209ENST00000589949 C14orf166Q9Y224 244 aaKnown RBP13.1□□□□□ -0.31
H3F3B-209ENST00000589949 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
H3F3B-209ENST00000589949 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 C4BPBP20851 252 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
H3F3B-209ENST00000589949 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-209ENST00000589949 ENKURQ8TC29 256 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 HEYLQ9NQ87 328 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-209ENST00000589949 TMEM56-RWDD3S4R434 201 aa13.09□□□□□ -0.31
H3F3B-209ENST00000589949 A0A1W2PS18 150 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 DISC1C4P0D8 188 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 PRR20EP86478 221 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 PRR20CP86479 221 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 PRR20DP86480 221 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 PRR20BP86481 221 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 PRR20AP86496 221 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 DHODHQ02127 395 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-209ENST00000589949 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 STHQ8IWL8 128 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 GLMPQ8WWB7 406 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
H3F3B-209ENST00000589949 TRAV30A0A087WSZ9 112 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 CEBPZOSA8MTT3 80 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 OR10J1P30954 320 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 BTCP35070 178 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms