RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR5C1Q8NGR4 320 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BHQ93079 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 RAB40CQ96S21 281 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 CCL13Q99616 98 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BNQ99877 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BMQ99879 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 C20orf24Q9BUV8 137 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 CTDSP1Q9GZU7 261 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 FGF23Q9GZV9 251 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 RETNQ9HD89 108 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 PUS1Q9Y606 427 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 IGKV1D-13A0A0B4J2D9 117 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 IGKV1-6A0A0C4DH72 117 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-209ENST00000589941 SLC25A17O43808 307 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 PTBP3O95758 552 aaKnown RBP5.98□□□□□ -1.45
SMAD4-209ENST00000589941 LCATP04180 440 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 TK1P04183 234 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 IGKV1-13P0DP09 117 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 BCL2P10415 239 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 F2RP25116 425 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 CD200P41217 278 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 RPS10P46783 165 aaKnown RBP5.98□□□□□ -1.45
SMAD4-209ENST00000589941 CEBPDP49716 269 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-209ENST00000589941 OR2B8PP59922 312 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 VAMP2P63027 116 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 SERF2P84101 59 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 AKIRIN2Q53H80 203 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 IGSF11Q5DX21 431 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 AKR1C8PQ5T2L2 129 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 NCR3LG1Q68D85 454 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF600Q6ZNG1 722 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF818PQ6ZRF7 136 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 CALHM1Q8IU99 346 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF695Q8IW36 515 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 GAPTQ8N292 157 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 GCSAMQ8N6F7 178 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 CYB561D1Q8N8Q1 229 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 KLHL30-AS1Q8NEE0 82 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 RNASEH2CQ8TDP1 164 aaKnown RBP5.98□□□□□ -1.45
SMAD4-209ENST00000589941 NIPSNAP3BQ9BS92 247 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 SDF2L1Q9HCN8 221 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 TIMM9Q9Y5J7 89 aa5.98□□□□□ -1.45
SMAD4-209ENST00000589941 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 IQCF6A8MYZ5 107 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 FAM90A26D6RGX4 464 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 SSSCA1O60232 199 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 PGLYRP1O75594 196 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-209ENST00000589941 YIF1AO95070 293 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 COX7A1P24310 79 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 S100A2P29034 98 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 GPX4P36969 197 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-209ENST00000589941 SSTP61278 116 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 MSMO1Q15800 293 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 CEACAM21Q3KPI0 293 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 C9orf66Q5T8R8 295 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 PLCXD3Q63HM9 321 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 CMTM1Q8IZ96 169 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 MRPL30Q8TCC3 161 aaKnown RBP5.97□□□□□ -1.45
SMAD4-209ENST00000589941 H1FXQ92522 213 aaKnown RBP5.97□□□□□ -1.45
SMAD4-209ENST00000589941 GPR146Q96CH1 333 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 KAAG1Q9UBP8 84 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 RFNGQ9Y644 331 aa5.97□□□□□ -1.45
SMAD4-209ENST00000589941 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.45
SMAD4-209ENST00000589941 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
SMAD4-209ENST00000589941 TGIF2-C20orf24A0A0A6YYL0 155 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 TRAV38-1A0A0B4J264 116 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 A0A0G2JRQ6 117 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF727A8MUV8 499 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 PPP1R2P9O14990 202 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 DEGS1O15121 323 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 OR7C1O76099 320 aaPredicted RBP5.96□□□□□ -1.46
SMAD4-209ENST00000589941 TYMSP04818 313 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 PFN1P07737 140 aaKnown RBP5.96□□□□□ -1.46
SMAD4-209ENST00000589941 SCTP09683 121 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 P0C879 139 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 BCL3P20749 454 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 MYCNOSP40205 109 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 HAAOP46952 286 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 RUNX1Q01196 453 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF726P1Q15940 193 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 LBHQ53QV2 105 aaPredicted RBP5.96□□□□□ -1.46
SMAD4-209ENST00000589941 TEX36Q5VZQ5 186 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF343Q6P1L6 599 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 CYP2G1PQ6ZSU1 146 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 SLC25A26Q70HW3 274 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 MOB1BQ7L9L4 216 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF329Q86UD4 541 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 HAPLN4Q86UW8 402 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 STX12Q86Y82 276 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 MKXQ8IYA7 352 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 OR5A2Q8NGI9 324 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 PINX1Q96BK5 328 aaKnown RBP5.96□□□□□ -1.46
SMAD4-209ENST00000589941 FAM210BQ96KR6 192 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 FAM110AQ9BQ89 295 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 PKIBQ9C010 78 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 SRD5A3Q9H8P0 318 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 RPRMQ9NS64 109 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 VAX2Q9UIW0 290 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 PITPNC1Q9UKF7 332 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms