RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 WNT10AQ9GZT5 417 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 RNF24Q9Y225 148 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 IGKV1D-37A0A075B6S9 117 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 C9JCJ5 164 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 FCN1O00602 326 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
VPS25-203ENST00000589520 S100PP25815 95 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 S100A7P31151 101 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 AKR1C3P42330 323 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 ATP5J2P56134 94 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 RPL23P62829 140 aaKnown RBP8.27□□□□□ -1.09
VPS25-203ENST00000589520 KLRD1Q13241 179 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 ZNF674Q2M3X9 581 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 MIR17HGQ75NE6 70 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 FAM24BQ8N5W8 94 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 TMEM37Q8WXS4 190 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
VPS25-203ENST00000589520 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 IMMP2LQ96T52 175 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
VPS25-203ENST00000589520 SPTBN1Q01082 2364 aaKnown RBP8.26□□□□□ -1.09
VPS25-203ENST00000589520 TRBV24-1A0A075B6N3 115 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 I3L2K1 104 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 HYPMO75409 117 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 HLA-DRB1P01911 266 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 REG1AP05451 166 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 COX6B1P14854 86 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 SLC25A16P16260 332 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 GATA3P23771 443 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 UBE2G2P60604 165 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 SSBP2P81877 361 aaPredicted RBP8.26□□□□□ -1.09
VPS25-203ENST00000589520 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
VPS25-203ENST00000589520 ADIRFQ15847 76 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 ARPC1AQ92747 370 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 OR5B12Q96R08 314 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 HIVEP3Q5T1R4 2406 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
VPS25-203ENST00000589520 NCBP2LA6PVI3 153 aaKnown RBP8.25□□□□□ -1.09
VPS25-203ENST00000589520 NPFFO15130 113 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 OR7C2O60412 319 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 EIF3GO75821 320 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS25-203ENST00000589520 NDUFB4O95168 129 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 GATA2P23769 480 aaPredicted RBP8.25□□□□□ -1.09
VPS25-203ENST00000589520 SRP14P37108 136 aaKnown RBP8.25□□□□□ -1.09
VPS25-203ENST00000589520 ATP5G3P48201 142 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 MFAP2P55001 183 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 CX3CL1P78423 397 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 ELOBQ15370 118 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 KLK9Q2XQG4 91 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 ISOC2Q96AB3 205 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 TXN2Q99757 166 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 RASL11BQ9BPW5 248 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 PAXXQ9BUH6 204 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 OR51M1Q9H341 326 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 KLK9Q9UKQ9 250 aa8.25□□□□□ -1.09
VPS25-203ENST00000589520 TNCP24821 2201 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 H7BYZ3 331 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 IGLC1P0CG04 106 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 NPPCP23582 126 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 FCGR2BP31994 310 aaPredicted RBP8.24□□□□□ -1.09
VPS25-203ENST00000589520 MFAP4P55083 255 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 TAS2R60P59551 318 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
VPS25-203ENST00000589520 ZNF90Q03938 601 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 KCNIP4Q6PIL6 250 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 LINC00305Q7Z4B0 112 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 DYNAPQ8N1N2 210 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 OR5AU1Q8NGC0 362 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 SLC25A2Q9BXI2 301 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 MEGF9Q9H1U4 602 aa8.24□□□□□ -1.09
VPS25-203ENST00000589520 GAR1Q9NY12 217 aaKnown RBP8.24□□□□□ -1.09
VPS25-203ENST00000589520 YTHDF2Q9Y5A9 579 aaKnown RBP8.24□□□□□ -1.09
VPS25-203ENST00000589520 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 IGHV1-69DA0A0B4J2H0 117 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 CENPVL3A0A0U1RRI6 287 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 A0A1W2PRD5 423 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 A0A1W2PRF3 423 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 A0A1W2PRM7 423 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 HELTA6NFD8 242 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
VPS25-203ENST00000589520 S100A6P06703 90 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 RD3LP0DJH9 198 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 SAA4P35542 130 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 UBE2L3P68036 154 aaKnown RBP8.23□□□□□ -1.09
VPS25-203ENST00000589520 PATE2Q6UY27 113 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 Q8N9W7 124 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 VN1R17PQ8TDU5 208 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 ZNF503Q96F45 646 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 FAM210BQ96KR6 192 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 ZNF355PQ9NSJ1 428 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 TMEM14CQ9P0S9 112 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
VPS25-203ENST00000589520 NBASA2RRP1 2371 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms