RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ODF3BA8MYP8 253 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 COX7A2P2O60397 106 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 NDUFB4O95168 129 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 CRYGCP07315 174 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 NPPCP23582 126 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 PRTN3P24158 256 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 HTR1DP28221 377 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 RPL35P42766 123 aaKnown RBP7.97□□□□□ -1.13
VPS25-202ENST00000589219 GPR6P46095 362 aaPredicted RBP7.97□□□□□ -1.13
VPS25-202ENST00000589219 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
VPS25-202ENST00000589219 C1orf122Q6ZSJ8 110 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 Q71RC1 249 aaPredicted RBP7.97□□□□□ -1.13
VPS25-202ENST00000589219 PPP1R27Q86WC6 154 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 TRGV9Q99603 122 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 SRD5A3Q9H8P0 318 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
VPS25-202ENST00000589219 ARFGEF3Q5TH69 2177 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 A0A1W2PRE2 83 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 E7EUB6 86 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 OR7C2O60412 319 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 GGCTO75223 188 aaKnown RBP7.96□□□□□ -1.14
VPS25-202ENST00000589219 LY6G6DO95868 133 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.14
VPS25-202ENST00000589219 PAX1P15863 534 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 LCN2P80188 198 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 FABP9Q0Z7S8 132 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 CCDC144NLQ6NUI1 221 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 OR51G1Q8NGK1 321 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 OR1L6Q8NGR2 347 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 SLC25A33Q9BSK2 321 aa7.96□□□□□ -1.14
VPS25-202ENST00000589219 FNDC4Q9H6D8 234 aaPredicted RBP7.96□□□□□ -1.14
VPS25-202ENST00000589219 F11RQ9Y624 299 aaKnown RBP7.96□□□□□ -1.14
VPS25-202ENST00000589219 ROS1P08922 2347 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 IGKV1D-37A0A075B6S9 117 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 ELOA3CA0A087WX78 387 aaPredicted RBP7.95□□□□□ -1.14
VPS25-202ENST00000589219 TEX22C9J3V5 150 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 PPP5D1E7EU14 171 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 TIMM23O14925 209 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 NDUFA3O95167 84 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 TYMSP04818 313 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 FAM3BP58499 235 aaPredicted RBP7.95□□□□□ -1.14
VPS25-202ENST00000589219 UBE2L3P68036 154 aaKnown RBP7.95□□□□□ -1.14
VPS25-202ENST00000589219 PLGLAQ15195 96 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 MINOS1Q5TGZ0 78 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 C10orf113Q5VZT2 155 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 STXBP6Q8NFX7 210 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 OR2T6Q8NHC8 308 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 SRSF12Q8WXF0 261 aaKnown RBP7.95□□□□□ -1.14
VPS25-202ENST00000589219 CFHR4Q92496 578 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 NPIPB3Q92617 1050 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 RITA1Q96K30 269 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 DNAJC4Q9NNZ3 241 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 MINOS1-NBL1R4GNA1 71 aa7.95□□□□□ -1.14
VPS25-202ENST00000589219 ZNF98A6NK75 572 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
VPS25-202ENST00000589219 NBR2O15453 112 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 FOXH1O75593 365 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 LY6HO94772 140 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 TRGC2P03986 189 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 S100A9P06702 114 aaKnown RBP7.94□□□□□ -1.14
VPS25-202ENST00000589219 FABP1P07148 127 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 CNTFRP26992 372 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 MEOX2P50222 304 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 EFNA4P52798 201 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 ATP5J2P56134 94 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 ARF6P62330 175 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 MMDQ15546 238 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 CIARTQ8N365 385 aaPredicted RBP7.94□□□□□ -1.14
VPS25-202ENST00000589219 TMEM116Q8NCL8 245 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 NPBQ8NG41 125 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 OR2T10Q8NGZ9 312 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 OR4X1Q8NH49 305 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 TMEM37Q8WXS4 190 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 ZNF503Q96F45 646 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 MISP3Q96FF7 219 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 SFRP2Q96HF1 295 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 DERL1Q9BUN8 251 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 SLC25A2Q9BXI2 301 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 FBXL15Q9H469 300 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 TNFRSF19Q9NS68 423 aa7.94□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BKO60814 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 MOSP00540 346 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 REG1AP05451 166 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BJP06899 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HOXA5P20719 270 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BOP23527 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 GATA2P23769 480 aaPredicted RBP7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BBP33778 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 DLX1P56177 255 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BDP58876 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 PLP1P60201 277 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BCP62807 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 MLANAQ16655 118 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST2H2BEQ16778 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.93□□□□□ -1.14
VPS25-202ENST00000589219 HCP5Q6MZN7 132 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms