RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 RABAC1Q9UI14 185 aa10.76□□□□□ -0.69
DNMT1-217ENST00000589091 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
DNMT1-217ENST00000589091 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 SULT1A3P0DMM9 295 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 SULT1A4P0DMN0 295 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 DEFB131AP59861 70 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 EWSR1Q01844 656 aaKnown RBP eCLIP10.75□□□□□ -0.69
DNMT1-217ENST00000589091 LILRB2Q8N423 598 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 GPR146Q96CH1 333 aa10.75□□□□□ -0.69
DNMT1-217ENST00000589091 C11orf68Q9H3H3 251 aaKnown RBP10.75□□□□□ -0.69
DNMT1-217ENST00000589091 PIGBOS1A0A0B4J2F0 54 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
DNMT1-217ENST00000589091 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 P2RY1P47900 373 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 YPEL3P61236 119 aaPredicted RBP10.74□□□□□ -0.69
DNMT1-217ENST00000589091 MLANAQ16655 118 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 TIGITQ495A1 244 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 TMEM41BQ5BJD5 291 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 STHQ8IWL8 128 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 STXBP6Q8NFX7 210 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 Q8WTZ3 238 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
DNMT1-217ENST00000589091 ALMS1Q8TCU4 4167 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 A0A0B4J2A0 478 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 HELTA6NFD8 242 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 K7EQG2 157 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 LY6G6CO95867 125 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 HNRNPCP07910 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
DNMT1-217ENST00000589091 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 ANXA3P12429 323 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 NPY1RP25929 384 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 OR10J1P30954 320 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 RND2P52198 227 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 AP2S1P53680 142 aaPredicted RBP10.73□□□□□ -0.69
DNMT1-217ENST00000589091 SRPXP78539 464 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 TMEM187Q14656 261 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 LEMD1Q68G75 181 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 PRSS54Q6PEW0 395 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 OR11H2Q8NH07 326 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 SHPKQ9UHJ6 478 aa10.73□□□□□ -0.69
DNMT1-217ENST00000589091 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
DNMT1-217ENST00000589091 CCR6P51684 374 aa10.72□□□□□ -0.69
DNMT1-217ENST00000589091 MORN3Q6PF18 240 aaPredicted RBP10.72□□□□□ -0.69
DNMT1-217ENST00000589091 FAM24BQ8N5W8 94 aa10.72□□□□□ -0.69
DNMT1-217ENST00000589091 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
DNMT1-217ENST00000589091 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
DNMT1-217ENST00000589091 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
DNMT1-217ENST00000589091 U3KQ87 197 aa10.72□□□□□ -0.69
DNMT1-217ENST00000589091 U3KQE9 123 aa10.72□□□□□ -0.69
DNMT1-217ENST00000589091 FABP12A6NFH5 140 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 IFNA10P01566 189 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 SPP1P10451 314 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 ATP5IP56385 69 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-217ENST00000589091 SMCO1Q147U7 214 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 NMSQ5H8A3 153 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 DCANP1Q8TF63 244 aa10.71□□□□□ -0.69
DNMT1-217ENST00000589091 DUXBA0A1W2PPF3 345 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 H3BMQ9 156 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 TOMM40O96008 361 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 AKR1C4P17516 323 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 TNFSF8P32971 234 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 AP3S2P59780 193 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 DHRS2Q13268 280 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 RBMS2Q15434 407 aaKnown RBP10.7□□□□□ -0.7
DNMT1-217ENST00000589091 C16orf54Q6UWD8 224 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
DNMT1-217ENST00000589091 LGI3Q8N145 548 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 DTD1Q8TEA8 209 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 SOSTQ9BQB4 213 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 HYDINQ4G0P3 5121 aa10.7□□□□□ -0.7
DNMT1-217ENST00000589091 NXPH3O95157 252 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 IFNA4P05014 189 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 IL4P05112 153 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 NUP62P37198 522 aaPredicted RBP10.69□□□□□ -0.7
DNMT1-217ENST00000589091 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 NPIPB3Q92617 1050 aa10.69□□□□□ -0.7
DNMT1-217ENST00000589091 SEPSECSQ9HD40 501 aaKnown RBP10.69□□□□□ -0.7
DNMT1-217ENST00000589091 RD3LP0DJH9 198 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 TCTAP57738 103 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 SUPT4H1P63272 117 aaKnown RBP10.68□□□□□ -0.7
DNMT1-217ENST00000589091 USF2Q15853 346 aaPredicted RBP10.68□□□□□ -0.7
DNMT1-217ENST00000589091 LYZL2Q7Z4W2 148 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 OR1S1Q8NH92 325 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 DEDD2Q8WXF8 326 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 RBKSQ9H477 322 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 PRR13Q9NZ81 148 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 PFDN2Q9UHV9 154 aa10.68□□□□□ -0.7
DNMT1-217ENST00000589091 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
DNMT1-217ENST00000589091 MIFP14174 115 aa10.67□□□□□ -0.7
DNMT1-217ENST00000589091 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
DNMT1-217ENST00000589091 SNRPD3P62318 126 aaKnown RBP10.67□□□□□ -0.7
DNMT1-217ENST00000589091 TMEM128Q5BJH2 165 aa10.67□□□□□ -0.7
DNMT1-217ENST00000589091 LGALS9CQ6DKI2 356 aa10.67□□□□□ -0.7
DNMT1-217ENST00000589091 TOMM5Q8N4H5 51 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms