RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 IQSEC2Q5JU85 1478 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 TONSLQ96HA7 1378 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 KIF1BO60333 1816 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV1D-43A0A0B4J1Z2 117 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 KPNA3O00505 521 aaPredicted RBP1.11□□□□□ -2.23
SMAD4-207ENST00000589076 FAAHO00519 579 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 MRPS14O60783 128 aaKnown RBP1.11□□□□□ -2.23
SMAD4-207ENST00000589076 E2F6O75461 281 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 LYPLA2O95372 231 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 IFNA10P01566 189 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 PMP2P02689 132 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 ANGP03950 147 aaKnown RBP1.11□□□□□ -2.23
SMAD4-207ENST00000589076 CLPSP04118 112 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 RPS17P08708 135 aaKnown RBP1.11□□□□□ -2.23
SMAD4-207ENST00000589076 AAED1Q7RTV5 226 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 ANKRD29Q8N6D5 301 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 C9orf163Q8N9P6 203 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 TMEM106AQ96A25 262 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 TOMM6Q96B49 74 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 PPP1R14BQ96C90 147 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 NIPSNAP1Q9BPW8 284 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 MED9Q9NWA0 146 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 UBAP1Q9NZ09 502 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 MRPL27Q9P0M9 148 aaKnown RBP1.11□□□□□ -2.23
SMAD4-207ENST00000589076 CKLFQ9UBR5 152 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 PKIGQ9Y2B9 76 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 MYH7BA7E2Y1 1941 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
SMAD4-207ENST00000589076 FRYLO94915 3013 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 COL4A5P29400 1685 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 RIC1Q4ADV7 1423 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 SETD5Q9C0A6 1442 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 TRAV9-1A0A075B6T8 112 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV2-40A0A087WW87 121 aaPredicted RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 EXOC1LA0A1B0GW35 172 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 FUOMA2VDF0 154 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV2D-40P01614 121 aaPredicted RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 TTRP02766 147 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 MYL6P60660 151 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 ZNF345Q14585 488 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 KCNJ8Q15842 424 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 UNQ6190/PRO20217Q6UXQ8 127 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 PFN4Q8NHR9 129 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 C8orf76Q96K31 380 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 CMSS1Q9BQ75 279 aaKnown RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 ADAT1Q9BUB4 502 aaKnown RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 ULBP3Q9BZM4 244 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 C11orf68Q9H3H3 251 aaKnown RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 TP73-AS1Q9UF72 201 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 V9GYY5 206 aaPredicted RBP1.1□□□□□ -2.23
SMAD4-207ENST00000589076 NEO1Q92859 1461 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 ARFGEF3Q5TH69 2177 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 PIK3C2AO00443 1686 aa1.1□□□□□ -2.23
SMAD4-207ENST00000589076 SBF1O95248 1867 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 PIK3C2GO75747 1445 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 OR4C46A6NHA9 309 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 PIRO00625 290 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 CRYZL1O95825 349 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 G6PCP35575 357 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 CDKN2CP42773 168 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 RPS20P60866 119 aaKnown RBP1.09□□□□□ -2.23
SMAD4-207ENST00000589076 RUNX1Q01196 453 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 AESQ08117 197 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 KISS1Q15726 138 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 MIR17HGQ75NE6 70 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 DEFB128Q7Z7B8 93 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 ZNF439Q8NDP4 499 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 H1FXQ92522 213 aaKnown RBP1.09□□□□□ -2.23
SMAD4-207ENST00000589076 TMEM147Q9BVK8 224 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 UCK1Q9HA47 277 aa1.09□□□□□ -2.23
SMAD4-207ENST00000589076 SOX21Q9Y651 276 aaPredicted RBP1.09□□□□□ -2.23
SMAD4-207ENST00000589076 TTC21AQ8NDW8 1320 aa1.09□□□□□ -2.24
SMAD4-207ENST00000589076 SCN10AQ9Y5Y9 1956 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 ALPK2Q86TB3 2170 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 DMXL2Q8TDJ6 3036 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 TRAV26-2A0A0B4J265 109 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 TCRBP04435 133 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 HTR1AP08908 422 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 RBP1P09455 135 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 IL9P15248 144 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 LSM6P62312 80 aaKnown RBP1.08□□□□□ -2.24
SMAD4-207ENST00000589076 RANP62826 216 aaKnown RBP1.08□□□□□ -2.24
SMAD4-207ENST00000589076 EDDM3AQ14507 147 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 LCN15Q6UWW0 184 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 ZNF826PQ6ZT77 177 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 WFDC11Q8NEX6 87 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 OR4D11Q8NGI4 311 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 TERB2Q8NHR7 220 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 C10orf105Q8TEF2 133 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 BORCS7Q96B45 105 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 RETNLBQ9BQ08 111 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 GINS4Q9BRT9 223 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
SMAD4-207ENST00000589076 C20orf27Q9GZN8 174 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms