RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 DNHD1Q96M86 4753 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 FBN3Q75N90 2809 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 A8MWP6 167 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 TNFRSF13BO14836 293 aaPredicted RBP11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 MMP23AO75900 390 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 RBP4P02753 201 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 COX6B1P14854 86 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 ADMP35318 185 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 CX3CL1P78423 397 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 PAX2Q02962 417 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 BSPH1Q075Z2 132 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 OR10J3Q5JRS4 329 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 FAM231DQ6ZW35 169 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 LINC00469Q8N7U9 141 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 PERPQ96FX8 193 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 RNF5Q99942 180 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 AURKAIP1Q9NWT8 199 aaPredicted RBP11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 NAGKQ9UJ70 344 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 V9GYV3 84 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 AKAP9Q99996 3911 aa11.37□□□□□ -0.59
NEDD4L-223ENST00000588516 PGPEP1LA6NFU8 196 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 B9A039 149 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 K7EN84 100 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 HOXB4P17483 251 aaPredicted RBP11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 CHRNB4P30926 498 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 RND1Q92730 232 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 RNASE6Q93091 150 aaKnown RBP11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
NEDD4L-223ENST00000588516 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 AMY1AP04745 511 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 RD3LP0DJH9 198 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 TDGF1P3P51864 188 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 TMEM155Q4W5P6 130 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 S100A7AQ86SG5 101 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 CCL17Q92583 94 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 TRGV9Q99603 122 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 C2orf88Q9BSF0 95 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 ZNF331Q9NQX6 463 aaPredicted RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 SMIM27A0A1W2PRY6 76 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 IZUMO1RA6ND01 250 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 M0QZK8 103 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 REG1AP05451 166 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 HNF1AP20823 631 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 BRS3P32247 399 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 IER3P46695 156 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 CASP6P55212 293 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 CDPF1Q6NVV7 123 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 RNF24Q9Y225 148 aa11.35□□□□□ -0.59
NEDD4L-223ENST00000588516 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 SLC17A3O00476 420 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 THBDP07204 575 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 CD3EP07766 207 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 IGHV1-8P0DP01 117 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 HIST1H1EP10412 219 aaKnown RBP11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 MYOD1P15172 320 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 CCL3L1P16619 93 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 UTF1Q5T230 341 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 CYB5R2Q6BCY4 276 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 OR8I2Q8N0Y5 310 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 SIGLECL1Q8N7X8 197 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 GRAMD2BQ96HH9 432 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 SLC25A2Q9BXI2 301 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 ZNF586Q9NXT0 402 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 NAT8BQ9UHF3 227 aa11.34□□□□□ -0.59
NEDD4L-223ENST00000588516 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 PRR14LQ5THK1 2151 aa11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 YLPM1P49750 1951 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 IGHV1-69-2A0A0G2JMI3 117 aa11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 ZNF705FA8MVS1 300 aaPredicted RBP11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 PEX7O00628 323 aa11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
NEDD4L-223ENST00000588516 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms