RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ECSCRQ19T08 205 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 UNQ5815/PRO19632Q6UWF5 114 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 SPNS3Q6ZMD2 512 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 GATAD1Q8WUU5 269 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 TMEM37Q8WXS4 190 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 FUT9Q9Y231 359 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 A6NDX4 124 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 SOHLH1Q5JUK2 328 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 ZFHX3Q15911 3703 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 ZANQ9Y493 2812 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 MDFIC2A0A1B0GVS7 189 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 OR5G3P0C626 314 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 IGLC1P0CG04 106 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 CEBPGP53567 150 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 MIR17HGQ75NE6 70 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 TMEM68Q96MH6 324 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 PFDN5Q99471 154 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 GSX1Q9H4S2 264 aaPredicted RBP15.61■□□□□ 0.09
TRIM47-204ENST00000587339 DNAJC4Q9NNZ3 241 aa15.61■□□□□ 0.09
TRIM47-204ENST00000587339 TMA7Q9Y2S6 64 aaKnown RBP15.61■□□□□ 0.09
TRIM47-204ENST00000587339 PSMB11A5LHX3 300 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 LINC01548A6NM66 108 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 COX7A2P2O60397 106 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 CLN5O75503 358 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 MEF2BQ02080 365 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-204ENST00000587339 DEFB112Q30KQ8 113 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 ATRAIDQ6UW56 229 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 BCL6BQ8N143 479 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-204ENST00000587339 CYB561D1Q8N8Q1 229 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 OR1L4Q8NGR5 311 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 FAM110DQ8TAY7 271 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-204ENST00000587339 DOK5Q9P104 306 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 CREBBPQ92793 2442 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 M0QZK8 103 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 SNAPINO95295 136 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 AKIRIN2Q53H80 203 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 RNF2Q99496 336 aa15.6■□□□□ 0.09
TRIM47-204ENST00000587339 NKX6-2Q9C056 277 aaPredicted RBP15.6■□□□□ 0.09
TRIM47-204ENST00000587339 PAGE4O60829 102 aa15.59■□□□□ 0.09
TRIM47-204ENST00000587339 FSHBP01225 129 aa15.59■□□□□ 0.09
TRIM47-204ENST00000587339 C10orf113Q5VZT2 155 aa15.59■□□□□ 0.09
TRIM47-204ENST00000587339 SUN5Q8TC36 379 aa15.59■□□□□ 0.09
TRIM47-204ENST00000587339 MRPL32Q9BYC8 188 aaKnown RBP15.59■□□□□ 0.09
TRIM47-204ENST00000587339 TECRQ9NZ01 308 aaKnown RBP15.59■□□□□ 0.09
TRIM47-204ENST00000587339 ELOA3CA0A087WX78 387 aaPredicted RBP15.58■□□□□ 0.09
TRIM47-204ENST00000587339 OR2J3O76001 311 aa15.58■□□□□ 0.09
TRIM47-204ENST00000587339 HIST1H1BP16401 226 aaKnown RBP15.58■□□□□ 0.09
TRIM47-204ENST00000587339 NPBWR1P48145 328 aa15.58■□□□□ 0.09
TRIM47-204ENST00000587339 TAS2R45P59539 299 aa15.58■□□□□ 0.09
TRIM47-204ENST00000587339 C9orf152Q5JTZ5 239 aa15.58■□□□□ 0.09
TRIM47-204ENST00000587339 G3V318 75 aa15.58■□□□□ 0.08
TRIM47-204ENST00000587339 ORM2P19652 201 aa15.58■□□□□ 0.08
TRIM47-204ENST00000587339 CD81P60033 236 aa15.58■□□□□ 0.08
TRIM47-204ENST00000587339 SMUG1Q53HV7 270 aa15.58■□□□□ 0.08
TRIM47-204ENST00000587339 CIARTQ8N365 385 aaPredicted RBP15.58■□□□□ 0.08
TRIM47-204ENST00000587339 S4R3C0 116 aa15.58■□□□□ 0.08
TRIM47-204ENST00000587339 PRRC2AP48634 2157 aaKnown RBP15.57■□□□□ 0.08
TRIM47-204ENST00000587339 GCHFRP30047 84 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 MFAP4P55083 255 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 PATE2Q6UY27 113 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 C16orf82Q7Z2V1 217 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 OR1B1Q8NGR6 318 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 UHRF2Q96PU4 802 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 ZNF355PQ9NSJ1 428 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 FBXL7Q9UJT9 491 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 CSPG4Q6UVK1 2322 aa15.57■□□□□ 0.08
TRIM47-204ENST00000587339 GNG7O60262 68 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 NDUFB8O95169 186 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 IGKV1-17P01599 117 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 FABP1P07148 127 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 C8orf88P0DMB2 117 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 PSG1P11464 419 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 UBE2G2P60604 165 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 TIGITQ495A1 244 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 PQLC2Q6ZP29 291 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 FOXC2Q99958 501 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 C21orf62Q9NYP8 219 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 UNC79Q9P2D8 2635 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 OR7C2O60412 319 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 C9orf139Q6ZV77 190 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 OR4F5Q8NH21 305 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 OR4F4Q96R69 305 aa15.56■□□□□ 0.08
TRIM47-204ENST00000587339 PDZD2O15018 2839 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 TRAV30A0A087WSZ9 112 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 C11orf94C9JXX5 98 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 SMAD7O15105 426 aaKnown RBP15.55■□□□□ 0.08
TRIM47-204ENST00000587339 IGHV4-59P01825 116 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 RD3LP0DJH9 198 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 BTN1A1Q13410 526 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 MORN5Q5VZ52 161 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 CST9LP1Q5W188 147 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 LINC00305Q7Z4B0 112 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 CLRN3Q8NCR9 226 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 ZNF48Q96MX3 618 aaPredicted RBP15.55■□□□□ 0.08
TRIM47-204ENST00000587339 TRAV41A0A0B4J266 112 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 HYPMO75409 117 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 IER3P46695 156 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 PLP1P60201 277 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 KLK9Q2XQG4 91 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 Q56UQ5 140 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms