RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 IGKV1-17P01599 117 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 SULT1A3P0DMM9 295 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 SULT1A4P0DMN0 295 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 EIF2B2P49770 351 aaKnown RBP12.47□□□□□ -0.41
TRIM47-203ENST00000586495 TMEM187Q14656 261 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 TIGITQ495A1 244 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
TRIM47-203ENST00000586495 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
TRIM47-203ENST00000586495 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
TRIM47-203ENST00000586495 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 NPY1RP25929 384 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 TNFSF8P32971 234 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 P2RY1P47900 373 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 RND2P52198 227 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.41
TRIM47-203ENST00000586495 LEMD1Q68G75 181 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 PRSS54Q6PEW0 395 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 STHQ8IWL8 128 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 STXBP6Q8NFX7 210 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 LINC00476Q8WZB0 136 aa12.46□□□□□ -0.41
TRIM47-203ENST00000586495 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 K7EQG2 157 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 HNRNPCP07910 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRIM47-203ENST00000586495 ANXA3P12429 323 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 AKR1C4P17516 323 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 OR10J1P30954 320 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 FAUP35544 74 aaKnown RBP12.45□□□□□ -0.42
TRIM47-203ENST00000586495 CCR6P51684 374 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 MCFD2Q8NI22 146 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 U3KQ87 197 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 DNAH1Q9P2D7 4330 aa12.45□□□□□ -0.42
TRIM47-203ENST00000586495 HELTA6NFD8 242 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 H3BMQ9 156 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 NXPH3O95157 252 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 LY6G6CO95867 125 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 IFNA10P01566 189 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
TRIM47-203ENST00000586495 SRPXP78539 464 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 SMCO1Q147U7 214 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 LGI3Q8N145 548 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 FAM24BQ8N5W8 94 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 SOSTQ9BQB4 213 aa12.44□□□□□ -0.42
TRIM47-203ENST00000586495 AP3S2P59780 193 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 RBMS2Q15434 407 aaKnown RBP12.43□□□□□ -0.42
TRIM47-203ENST00000586495 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
TRIM47-203ENST00000586495 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 C11orf68Q9H3H3 251 aaKnown RBP12.43□□□□□ -0.42
TRIM47-203ENST00000586495 PRR13Q9NZ81 148 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 HSPB7Q9UBY9 170 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 U3KQE9 123 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 HYDINQ4G0P3 5121 aa12.43□□□□□ -0.42
TRIM47-203ENST00000586495 IL4P05112 153 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 ZNF688P0C7X2 276 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
TRIM47-203ENST00000586495 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 LYZL2Q7Z4W2 148 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 DTD1Q8TEA8 209 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 DCANP1Q8TF63 244 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
TRIM47-203ENST00000586495 TOMM40O96008 361 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 SPP1P10451 314 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
TRIM47-203ENST00000586495 DHRS2Q13268 280 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 MORN3Q6PF18 240 aaPredicted RBP12.41□□□□□ -0.42
TRIM47-203ENST00000586495 TOMM5Q8N4H5 51 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 OR1S1Q8NH92 325 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 ACY3Q96HD9 319 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 RBKSQ9H477 322 aa12.41□□□□□ -0.42
TRIM47-203ENST00000586495 DUXBA0A1W2PPF3 345 aa12.4□□□□□ -0.42
TRIM47-203ENST00000586495 IFNA4P05014 189 aa12.4□□□□□ -0.42
TRIM47-203ENST00000586495 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
TRIM47-203ENST00000586495 TRPT1Q86TN4 253 aaKnown RBP12.4□□□□□ -0.42
TRIM47-203ENST00000586495 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
TRIM47-203ENST00000586495 KLF9Q13886 244 aaPredicted RBP12.39□□□□□ -0.43
TRIM47-203ENST00000586495 USF2Q15853 346 aaPredicted RBP12.39□□□□□ -0.43
TRIM47-203ENST00000586495 TMEM128Q5BJH2 165 aa12.39□□□□□ -0.43
TRIM47-203ENST00000586495 TMED4Q7Z7H5 227 aa12.39□□□□□ -0.43
TRIM47-203ENST00000586495 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
TRIM47-203ENST00000586495 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
TRIM47-203ENST00000586495 CCDC160A6NGH7 325 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 S100A5P33763 92 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 NUP62P37198 522 aaPredicted RBP12.38□□□□□ -0.43
TRIM47-203ENST00000586495 NANOS2P60321 138 aaKnown RBP12.38□□□□□ -0.43
TRIM47-203ENST00000586495 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
TRIM47-203ENST00000586495 ACTL10Q5JWF8 245 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 OR51G1Q8NGK1 321 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 SLC25A21Q9BQT8 299 aaPredicted RBP12.38□□□□□ -0.43
TRIM47-203ENST00000586495 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
TRIM47-203ENST00000586495 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
TRIM47-203ENST00000586495 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms