RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 PSMB11A5LHX3 300 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 IGHV4-39P01824 125 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 CD99P14209 185 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 BRS3P32247 399 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 ELOBQ15370 118 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 C10orf113Q5VZT2 155 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 LHFPL4Q7Z7J7 247 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 STXBP6Q8NFX7 210 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 OR5B12Q96R08 314 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 SLC25A33Q9BSK2 321 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 TNFRSF19Q9NS68 423 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
LIG3-204ENST00000585740 HRNRQ86YZ3 2850 aaPredicted RBP8.98□□□□□ -0.97
LIG3-204ENST00000585740 HIVEP1P15822 2718 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 H7BYZ3 331 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 OR7C2O60412 319 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 FAM106CPP0CH98 169 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 CTRB1P17538 263 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 GATA2P23769 480 aaPredicted RBP8.97□□□□□ -0.97
LIG3-204ENST00000585740 S100PP25815 95 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 PLP1P60201 277 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 FXYD3Q14802 87 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 CTRB2Q6GPI1 263 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 Q8N6K4 173 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 OR4X1Q8NH49 305 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 PERPQ96FX8 193 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 BTF3L4Q96K17 158 aa8.97□□□□□ -0.97
LIG3-204ENST00000585740 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
LIG3-204ENST00000585740 TRBV24-1A0A075B6N3 115 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 NPIPB5A8MRT5 1133 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 FCN1O00602 326 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 NDUFB4O95168 129 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 TMEM11P17152 192 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 NPPCP23582 126 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 MFAP2P55001 183 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 SSBP2P81877 361 aaPredicted RBP8.96□□□□□ -0.98
LIG3-204ENST00000585740 CLEC2AQ6UVW9 174 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 ZNF562Q6V9R5 426 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 C16orf82Q7Z2V1 217 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 Q8WTZ3 238 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 TMEM37Q8WXS4 190 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 TMEM190Q8WZ59 177 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 FAM168AQ92567 244 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 TBX15Q96SF7 602 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 SSX3Q99909 188 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 TCEAL7Q9BRU2 100 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 WNT10AQ9GZT5 417 aa8.96□□□□□ -0.98
LIG3-204ENST00000585740 A0A1W2PRD5 423 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 A0A1W2PRF3 423 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 A0A1W2PRM7 423 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 C9JCJ5 164 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 I3L2K1 104 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 HYPMO75409 117 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 S100A6P06703 90 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 SRP14P37108 136 aaKnown RBP8.95□□□□□ -0.98
LIG3-204ENST00000585740 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
LIG3-204ENST00000585740 DSCR9P59020 149 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 S100A7AQ86SG5 101 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 LINC01551Q86U37 167 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 OR5AU1Q8NGC0 362 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 C10orf105Q8TEF2 133 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 ZNF503Q96F45 646 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 FAM167A-AS1Q96KT0 104 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 IMMP2LQ96T52 175 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 PAXXQ9BUH6 204 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 SLC25A2Q9BXI2 301 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 MRPL36Q9P0J6 103 aaKnown RBP8.95□□□□□ -0.98
LIG3-204ENST00000585740 AKAP9Q99996 3911 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 MTORP42345 2549 aa8.95□□□□□ -0.98
LIG3-204ENST00000585740 WNK2Q9Y3S1 2297 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 TRAV30A0A087WSZ9 112 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 MDFIC2A0A1B0GVS7 189 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 VWC2LB2RUY7 222 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 SCGB2A1O75556 95 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 GALR1P47211 349 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
LIG3-204ENST00000585740 ZNF90Q03938 601 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 PAX8Q06710 450 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 KIAA0141Q14154 515 aaPredicted RBP8.94□□□□□ -0.98
LIG3-204ENST00000585740 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 KCNIP4Q6PIL6 250 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 PATE2Q6UY27 113 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 OR51G1Q8NGK1 321 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 FAM210BQ96KR6 192 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 ZNF48Q96MX3 618 aaPredicted RBP8.94□□□□□ -0.98
LIG3-204ENST00000585740 OR51M1Q9H341 326 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 SAV1Q9H4B6 383 aaPredicted RBP8.94□□□□□ -0.98
LIG3-204ENST00000585740 ZNF355PQ9NSJ1 428 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 THYN1Q9P016 225 aa8.94□□□□□ -0.98
LIG3-204ENST00000585740 NCBP2LA6PVI3 153 aaKnown RBP8.93□□□□□ -0.98
LIG3-204ENST00000585740 NPFFO15130 113 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 PFN1P07737 140 aaKnown RBP8.93□□□□□ -0.98
LIG3-204ENST00000585740 CXCL1P09341 107 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 ATP5J2P56134 94 aa8.93□□□□□ -0.98
LIG3-204ENST00000585740 ZFP82Q8N141 532 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms