RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RASL11AQ6T310 242 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF329Q86UD4 541 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 THAP8Q8NA92 274 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 FAM57AQ8TBR7 257 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF596Q8TC21 504 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TMEM186Q96B77 213 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MBD6Q96DN6 1003 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 EP300Q09472 2414 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 APCSP02743 223 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RBMXL3Q8N7X1 1067 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LAMA5O15230 3695 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DMXL1Q9Y485 3027 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PEX7O00628 323 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DLEU1O43261 78 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF324O75467 553 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 REG1AP05451 166 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SSBP3Q9BWW4 388 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF331Q9NQX6 463 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 WASHC3Q9Y3C0 194 aa11.45□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PPIAL4EA0A075B759 164 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PPIAL4DF5H284 164 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PPIAL4FP0DN26 164 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SLAQ13239 276 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TNFRSF14Q92956 283 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RPH3ALQ9UNE2 315 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PPIAL4AQ9Y536 164 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DPRXA6NFQ7 191 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TMEM178BH3BS89 294 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 K7EM74 188 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 IGHV3-48P01763 117 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PMCHP20382 165 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 GSX1Q9H4S2 264 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SAP30LQ9HAJ7 183 aa11.44□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TNFRSF13BO14836 293 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MYCNOSP40205 109 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ZNF137PP52743 207 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TBR1Q16650 682 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NUDT10Q8NFP7 164 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 H1FXQ92522 213 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NUDT11Q96G61 164 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NAV3Q8IVL0 2385 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RP1L1Q8IWN7 2480 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C16orf97H3BN30 126 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RPLP1P05386 114 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CTRLP40313 264 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LINC00305Q7Z4B0 112 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NIT1Q86X76 327 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 WFDC8Q8IUA0 241 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 GRAMD2BQ96HH9 432 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CNOT1A5YKK6 2376 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-237ENST00000585163 A0A1W2PPI3 338 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 NDUFB3O43676 98 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 LYPD2Q6UXB3 125 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C18orf32Q8TCD1 76 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SLC25A17O43808 307 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CDKN1BP46527 198 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PRRX1P54821 245 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MFAP2P55001 183 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 BSPH1Q075Z2 132 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 VMA21Q3ZAQ7 101 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SPACA3Q8IXA5 215 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CCL17Q92583 94 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C7orf69Q9H7B7 122 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 TPSG1Q9NRR2 321 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MGAQ8IWI9 3026 aa11.42□□□□□ -0.58
CDK5RAP3-237ENST00000585163 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C3orf79P0CE67 100 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 MC5RP33032 325 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 STXBP6Q8NFX7 210 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 Q9UFV3 132 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CUL9Q8IWT3 2517 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CRYGCP07315 174 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DLX6P56179 175 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C19orf35Q6ZS72 473 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 FAM19A2Q8N3H0 131 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RITA1Q96K30 269 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 CTSZQ9UBR2 303 aa11.41□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C22orf46C9J442 243 aa11.4□□□□□ -0.58
CDK5RAP3-237ENST00000585163 PLAUP00749 431 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms