RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
SRSF1-209ENST00000585096 OR1S2Q8NGQ3 325 aa13.23□□□□□ -0.29
SRSF1-209ENST00000585096 Q8WTZ3 238 aa13.23□□□□□ -0.29
SRSF1-209ENST00000585096 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-209ENST00000585096 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
SRSF1-209ENST00000585096 HSPB7Q9UBY9 170 aa13.23□□□□□ -0.29
SRSF1-209ENST00000585096 TRAV2A0A0B4J234 112 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 ZNF701M0R085 212 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-209ENST00000585096 IFNA10P01566 189 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 RND2P52198 227 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 TMEM128Q5BJH2 165 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 LILRB2Q8N423 598 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 RBM38Q9H0Z9 239 aaKnown RBP13.22□□□□□ -0.29
SRSF1-209ENST00000585096 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 U3KQ87 197 aa13.22□□□□□ -0.29
SRSF1-209ENST00000585096 DUXBA0A1W2PPF3 345 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 IGLC1P0CG04 106 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 CRYBB3P26998 211 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 OR10J1P30954 320 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
SRSF1-209ENST00000585096 ZNF79Q15937 498 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 SPANXN2Q5MJ10 180 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 OR1S1Q8NH92 325 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 DTD1Q8TEA8 209 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 RNF183Q96D59 192 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.29
SRSF1-209ENST00000585096 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
SRSF1-209ENST00000585096 ATP5IP56385 69 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-209ENST00000585096 TMEM170AQ8WVE7 144 aa13.2□□□□□ -0.3
SRSF1-209ENST00000585096 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
SRSF1-209ENST00000585096 RBKSQ9H477 322 aa13.2□□□□□ -0.3
SRSF1-209ENST00000585096 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
SRSF1-209ENST00000585096 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 VAMP1P23763 118 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 P2RY1P47900 373 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
SRSF1-209ENST00000585096 ZNF124Q15973 351 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 NPIPB3Q92617 1050 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 ACY3Q96HD9 319 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 TENM2Q9NT68 2774 aa13.19□□□□□ -0.3
SRSF1-209ENST00000585096 JTBO76095 146 aa13.18□□□□□ -0.3
SRSF1-209ENST00000585096 IFNA4P05014 189 aa13.18□□□□□ -0.3
SRSF1-209ENST00000585096 DEFB131AP59861 70 aa13.18□□□□□ -0.3
SRSF1-209ENST00000585096 LYG2Q86SG7 212 aa13.18□□□□□ -0.3
SRSF1-209ENST00000585096 A0A0J9YWU9 116 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 HELTA6NFD8 242 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRSF1-209ENST00000585096 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 INPP1P49441 399 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
SRSF1-209ENST00000585096 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
SRSF1-209ENST00000585096 SFT2D2O95562 160 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 SLC25A6P12236 298 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-209ENST00000585096 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 TMED3Q9Y3Q3 217 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 U3KQE9 123 aa13.16□□□□□ -0.3
SRSF1-209ENST00000585096 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 K7EQG2 157 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 PITX3O75364 302 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 TOMM40O96008 361 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 IL4P05112 153 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-209ENST00000585096 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-209ENST00000585096 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
SRSF1-209ENST00000585096 CXorf65A6NEN9 183 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 NAP1L6A6NFF2 107 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 MED6O75586 246 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 UBE2MP61081 183 aaKnown RBP13.14□□□□□ -0.31
SRSF1-209ENST00000585096 RAB11AP62491 216 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 USF2Q15853 346 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-209ENST00000585096 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 STHQ8IWL8 128 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 PFDN2Q9UHV9 154 aa13.14□□□□□ -0.31
SRSF1-209ENST00000585096 RYR2Q92736 4967 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 SACSQ9NZJ4 4579 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 CA1P00915 261 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-209ENST00000585096 FABP1P07148 127 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 PSG1P11464 419 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
SRSF1-209ENST00000585096 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-209ENST00000585096 RARRES2Q99969 163 aa13.13□□□□□ -0.31
SRSF1-209ENST00000585096 IAPPP10997 89 aa13.12□□□□□ -0.31
SRSF1-209ENST00000585096 NUP62P37198 522 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-209ENST00000585096 DHRS2Q13268 280 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms