RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 GLYATL2Q8WU03 294 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 MPC2O95563 127 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 SERPINE2P07093 398 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 GPR183P32249 361 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 NUP62P37198 522 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-220ENST00000585031 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-220ENST00000585031 RPL30P62888 115 aaKnown RBP13.18□□□□□ -0.3
TOP3A-220ENST00000585031 SMCO1Q147U7 214 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 LGALSLQ3ZCW2 172 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-220ENST00000585031 LRRC37A5PQ49AS3 106 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
TOP3A-220ENST00000585031 M0R2N4 97 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 RGS13O14921 159 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 ARPC5O15511 151 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 TNFSF12O43508 249 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 RPL27AP46776 148 aaKnown RBP13.17□□□□□ -0.3
TOP3A-220ENST00000585031 BRWD1-AS2P59051 145 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 OR2B11Q5JQS5 317 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 OR51H1Q8NH63 302 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 ZNF502Q8TBZ5 544 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 RBPMSQ93062 196 aaKnown RBP13.17□□□□□ -0.3
TOP3A-220ENST00000585031 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 UFC1Q9Y3C8 167 aa13.17□□□□□ -0.3
TOP3A-220ENST00000585031 AGRNO00468 2067 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 A0A0D9SG52 128 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 MPTX1A8MV57 137 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 FCGR3BO75015 233 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 CDS2O95674 445 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 RLN2P04090 185 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 OR2F1Q13607 317 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
TOP3A-220ENST00000585031 ZNF66Q6ZN08 573 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
TOP3A-220ENST00000585031 PUSL1Q8N0Z8 303 aaKnown RBP13.16□□□□□ -0.3
TOP3A-220ENST00000585031 SLC35G3Q8N808 338 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-220ENST00000585031 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 ADTRPQ96IZ2 230 aa13.16□□□□□ -0.3
TOP3A-220ENST00000585031 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 TSC22D2O75157 780 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 ATG12O94817 140 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 S100A11P31949 105 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 IFITM2Q01629 132 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 OPCMLQ14982 345 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 LHFPL5Q8TAF8 219 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 ZNF414Q96IQ9 312 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
TOP3A-220ENST00000585031 FAM212BQ9NTI7 297 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-220ENST00000585031 MBD2Q9UBB5 411 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 TNFSF18Q9UNG2 199 aa13.15□□□□□ -0.3
TOP3A-220ENST00000585031 DNAH5Q8TE73 4624 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 KBTBD11O94819 623 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 RBMY1A1P0DJD3 496 aaKnown RBP13.14□□□□□ -0.31
TOP3A-220ENST00000585031 RBMY1CP0DJD4 496 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 CXCL2P19875 107 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 S100A10P60903 97 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 ZNF345Q14585 488 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 RBMY1FQ15415 496 aaKnown RBP13.14□□□□□ -0.31
TOP3A-220ENST00000585031 ACOT7LQ6ZUV0 252 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 TMUB2Q71RG4 321 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 ZNF767PQ75MW2 155 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 RNASE11Q8TAA1 199 aaKnown RBP13.14□□□□□ -0.31
TOP3A-220ENST00000585031 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
TOP3A-220ENST00000585031 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 C11orf94C9JXX5 98 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
TOP3A-220ENST00000585031 IL15RAQ13261 267 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 RAB32Q13637 225 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 Q8NAQ8 132 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
TOP3A-220ENST00000585031 SCGB1D2O95969 90 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 SLC25A6P12236 298 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
TOP3A-220ENST00000585031 HLA-DMBP28068 263 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 Q6ZTC4 211 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 KCNRGQ8N5I3 272 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 OR4A5Q8NH83 315 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 LSM10Q969L4 123 aaKnown RBP13.12□□□□□ -0.31
TOP3A-220ENST00000585031 GPHA2Q96T91 129 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 SCRT1Q9BWW7 348 aa13.12□□□□□ -0.31
TOP3A-220ENST00000585031 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 ST8SIA3O43173 380 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 TGOLN2O43493 480 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 CDK2AP2O75956 126 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 IFNA7P01567 189 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms