RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 ZNF664Q8N3J9 261 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 FAM57AQ8TBR7 257 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 ESDP10768 282 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 TMPRSS3P57727 454 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 SVILO95425 2214 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 MRPL14Q6P1L8 145 aaKnown RBP10.83□□□□□ -0.68
RNF43-208ENST00000584437 TMEM133Q9H2Q1 129 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 NDUFS6O75380 124 aaKnown RBP10.82□□□□□ -0.68
RNF43-208ENST00000584437 CD7P09564 240 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 COX6B1P14854 86 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 ATP5J2P56134 94 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 SEPSECSQ9HD40 501 aaKnown RBP10.82□□□□□ -0.68
RNF43-208ENST00000584437 CRIM1Q9NZV1 1036 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 TRAV12-3A0A0B4J271 114 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 IGKV1-12A0A0C4DH73 117 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 DUSP14O95147 198 aaKnown RBP10.82□□□□□ -0.68
RNF43-208ENST00000584437 IGKV1D-12P01611 117 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 IGLV3-19P01714 112 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 GUSBP1Q15486 140 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
RNF43-208ENST00000584437 CD5LO43866 347 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 PLAURQ03405 335 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 APC2O95996 2303 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 MYOD1P15172 320 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 FAM27E3Q08E93 113 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 ATP1A1-AS1Q5TC04 95 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
RNF43-208ENST00000584437 CCL3L1P16619 93 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 LHX2P50458 406 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 NPFFR1Q9GZQ6 430 aa10.82□□□□□ -0.68
RNF43-208ENST00000584437 LOC102723996A0A087X1L8 192 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 A0A0G2JMM0 328 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 A0A1W2PPB8 328 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 KIR3DP1A8MWS1 328 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 M0R2P5 195 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 CELA3BP08861 270 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 FDCSPQ8NFU4 85 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 GGTLC3B5MD39 225 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 TDGF1P13385 188 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 LINC01587Q99440 93 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 RHOGP84095 191 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
RNF43-208ENST00000584437 TPTE2P1Q5T6R2 138 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 MORN3Q6PF18 240 aaPredicted RBP10.81□□□□□ -0.68
RNF43-208ENST00000584437 EVI2AP22794 236 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 DLX4Q92988 240 aaPredicted RBP10.81□□□□□ -0.68
RNF43-208ENST00000584437 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
RNF43-208ENST00000584437 IGHV3OR16-8A0A075B7F1 116 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 OVOL1O14753 267 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 COL5A3P25940 1745 aaPredicted RBP10.8□□□□□ -0.68
RNF43-208ENST00000584437 CD28P10747 220 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 SPANXA1Q9NS26 97 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 ADCYAP1P18509 176 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 MST1P26927 711 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
RNF43-208ENST00000584437 TMEM42Q69YG0 159 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
RNF43-208ENST00000584437 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 FLVCR1-AS1Q8TAF5 88 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
RNF43-208ENST00000584437 TRAV5A0A0B4J249 113 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 D6R8Y8 96 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
RNF43-208ENST00000584437 MGST2Q99735 147 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 AHCTF1Q8WYP5 2266 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 ZNF883P0CG24 379 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
RNF43-208ENST00000584437 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 A8MWP6 167 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 TCRAP04437 139 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 SCN2AQ99250 2005 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 hDV102S1A0JD36 115 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 FOXF2Q12947 444 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 SPATA31B1PQ5VZV4 182 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
RNF43-208ENST00000584437 A0A087X0K7 114 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 GAGE12BA1L429 117 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 HGFACQ04756 655 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 FAM90A2PQ658T7 463 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 LCN12Q6JVE5 192 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 COX11Q9Y6N1 276 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 IGHV3OR16-10A0A075B7F0 116 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 TRGV9Q99603 122 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 RPUSD1Q9UJJ7 312 aaKnown RBP10.78□□□□□ -0.68
RNF43-208ENST00000584437 PPIFP30405 207 aaKnown RBP10.78□□□□□ -0.68
RNF43-208ENST00000584437 Q0VG73 95 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 PEMTQ9UBM1 199 aa10.78□□□□□ -0.68
RNF43-208ENST00000584437 ARID2Q68CP9 1835 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms