RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 MGST2Q99735 147 aa12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 GGTLC1Q9BX51 225 aa12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 TIMM9Q9Y5J7 89 aa12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 S4R3C0 116 aa12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 NIPBLQ6KC79 2804 aaeCLIP12.97□□□□□ -0.33
CDK5RAP3-230ENST00000584042 IGKV1D-37A0A075B6S9 117 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 TCRBV4S1A1TA0A5B7 111 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 ZFP92A6NM28 416 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 GNG7O60262 68 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 ATP6V0CP27449 155 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 OR10J1P30954 320 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 RUNX1Q01196 453 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 FOXL1Q12952 345 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 RAB31Q13636 194 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 ZNF343Q6P1L6 599 aa12.96□□□□□ -0.33
CDK5RAP3-230ENST00000584042 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 C17orf112F2Z3M2 114 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 AGPAT2O15120 278 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 IGHV3-23P01764 117 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 FABP1P07148 127 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 LGALS1P09382 135 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 GPR183P32249 361 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CAMLGP49069 296 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SPSB3Q6PJ21 355 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 ZNF709Q8N972 641 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PHYHIPLQ96FC7 376 aa12.95□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TGOLN2O43493 480 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SELENOTP62341 195 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 EIF5AL1Q6IS14 154 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CYP2G1PQ6ZSU1 146 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 OR2G3Q8NGZ4 309 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 RSG1Q9BU20 258 aa12.94□□□□□ -0.34
CDK5RAP3-230ENST00000584042 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TOMM40O96008 361 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SEC11BP0C7V7 166 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SPP1P10451 314 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 YPEL3P61236 119 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 GNB4Q9HAV0 340 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SLC45A2Q9UMX9 530 aa12.93□□□□□ -0.34
CDK5RAP3-230ENST00000584042 HAX1O00165 279 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CTSGP08311 255 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 ADMP35318 185 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SERF2P84101 59 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRR20EP86478 221 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRR20CP86479 221 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRR20DP86480 221 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRR20BP86481 221 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PRR20AP86496 221 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 KRTAP24-1Q3LI83 254 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TIGITQ495A1 244 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 STPG3Q8N7X2 389 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SLC25A32Q9H2D1 315 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PXMP4Q9Y6I8 212 aa12.92□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CFDP00746 253 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CLEC3BP05452 202 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CD28P10747 220 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 ARL3P36405 182 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 B2MP61769 119 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 ZNF90Q03938 601 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 MIC13Q5XKP0 118 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 BPIFCQ8NFQ6 507 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PEF1Q9UBV8 284 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-230ENST00000584042 I3L521 148 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TSPAN15O95858 294 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 LINC00869P0C866 280 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 AWAT1Q58HT5 328 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 SLC39A9Q9NUM3 307 aa12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-230ENST00000584042 PPP5D1E7EU14 171 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 BMPR1BO00238 502 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 OR2C1O95371 312 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PSG1P11464 419 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PLP1P60201 277 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZNF616Q08AN1 781 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PXDC1Q5TGL8 231 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TEX261Q6UWH6 196 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-230ENST00000584042 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms