RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 OR1P1Q8NH06 330 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 ACY3Q96HD9 319 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 FANCD2OSQ96PS1 177 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 THYN1Q9P016 225 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 IGLV11-55A0A075B6I3 123 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 TSPAN4O14817 238 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 NDUFB8O95169 186 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 MT-CO2P00403 227 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 IGHV3-11P01762 117 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 CD5P06127 495 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 SPP1P10451 314 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 AKR1C1Q04828 323 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 ATP5G2Q06055 141 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 C2orf83Q53S99 150 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 SLC16A13Q7RTY0 426 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 HSD17B11Q8NBQ5 300 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 NECAP1Q8NC96 275 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 NARS2Q96I59 477 aaKnown RBP8.51□□□□□ -1.05
TOP3A-216ENST00000583804 OR5B12Q96R08 314 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 ATP5SQ99766 215 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
TOP3A-216ENST00000583804 UQCC1Q9NVA1 299 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 MRPL36Q9P0J6 103 aaKnown RBP8.51□□□□□ -1.05
TOP3A-216ENST00000583804 TSSC4Q9Y5U2 329 aaPredicted RBP8.51□□□□□ -1.05
TOP3A-216ENST00000583804 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 TRBV9A0A0B4J1U6 114 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 A0A0G2JLM5 398 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 F8W036 122 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 SNAPINO95295 136 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 BRI3O95415 125 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 LY86O95711 162 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 FGF7P21781 194 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 HBG1P69891 147 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 HBG2P69892 147 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 RUNX1Q01196 453 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 BAXQ07812 192 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 BSXQ3C1V8 233 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 Q6ZRG5 221 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 C18orf65Q6ZTR6 163 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 ZNF491Q8N8L2 437 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 CLRN3Q8NCR9 226 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 TMEM147Q9BVK8 224 aa8.51□□□□□ -1.05
TOP3A-216ENST00000583804 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 ATP5IP56385 69 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-216ENST00000583804 KIAA0141Q14154 515 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-216ENST00000583804 ACSM6Q6P461 480 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 FAM223AQ8IWN6 122 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 SLC35E1Q96K37 410 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 UBE2E2Q96LR5 201 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 CITED1Q99966 193 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 RSG1Q9BU20 258 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 HRH4Q9H3N8 390 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
TOP3A-216ENST00000583804 CORTO00230 105 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-216ENST00000583804 CDX1P47902 265 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-216ENST00000583804 RND2P52198 227 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
TOP3A-216ENST00000583804 CD69Q07108 199 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 ZNF266Q14584 549 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 GUCA2BQ16661 112 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 MYOZ3Q8TDC0 251 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 NPIPB3Q92617 1050 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 EEF1AKMT3Q96AZ1 226 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 GNB4Q9HAV0 340 aa8.49□□□□□ -1.05
TOP3A-216ENST00000583804 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 FAM74A7A6NL05 159 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 K7EIM0 57 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 IFNA5P01569 189 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-216ENST00000583804 DLK1P80370 383 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 GAMTQ14353 236 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 KLK9Q2XQG4 91 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 FAM74A3Q4VXF1 159 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 NDUFA11Q86Y39 141 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 SCGB1C1Q8TD33 95 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 RNASEH2CQ8TDP1 164 aaKnown RBP8.48□□□□□ -1.05
TOP3A-216ENST00000583804 KLK9Q9UKQ9 250 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
TOP3A-216ENST00000583804 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 I3L2K1 104 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
TOP3A-216ENST00000583804 DFFBO76075 338 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 TSPAN15O95858 294 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 DEFB136Q30KP8 78 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms