RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 MRPL3P09001 348 aaKnown RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 MPC1LP0DKB6 136 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 BCL2P10415 239 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 ATP6V0CP27449 155 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 LOXP28300 417 aaPredicted RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 PFN2P35080 140 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 ZNF138P52744 262 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 KRTDAPP60985 99 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 RHOBP62745 196 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 BVES-AS1Q5T3Y7 98 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 Q6ZT83 130 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 DOLPP1Q86YN1 238 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 UMODL1-AS1Q8N2C9 162 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 TSTD1Q8NFU3 115 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 OR10P1Q8NGE3 313 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 OR13G1Q8NGZ3 307 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 DOK4Q8TEW6 326 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 ZNF418Q8TF45 676 aaPredicted RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 FGF13Q92913 245 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 GALMQ96C23 342 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 RTBDNQ9BSG5 229 aaPredicted RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 TRAPPC2LQ9UL33 140 aa3.53□□□□□ -1.84
SS18-223ENST00000583595 BOKQ9UMX3 212 aaPredicted RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 LSM5Q9Y4Y9 91 aaKnown RBP3.53□□□□□ -1.84
SS18-223ENST00000583595 VWA8A3KMH1 1905 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 TRAV8-6A0A0B4J262 113 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 TRAV38-1A0A0B4J264 116 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 A0A0J9YY10 115 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 A0A1B0GV50 99 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 A0A1B0GX78 115 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 DPRXA6NFQ7 191 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 TMEM212A6NML5 194 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 H3BRM9 83 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 HMGN4O00479 90 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 PITX3O75364 302 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 SLC25A14O95258 325 aaPredicted RBP3.52□□□□□ -1.85
SS18-223ENST00000583595 MPZL1O95297 269 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 NRASP01111 189 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 KRASP01116 189 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 HLA-DRB1P01911 266 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 GPX1P07203 203 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 SMIM10L1P0DMW3 83 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 CCL5P13501 91 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 CRISP2P16562 243 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 FXYD6P3P58550 94 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 PPP1CBP62140 327 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
SS18-223ENST00000583595 SEC11AP67812 179 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 HIST1H1AQ02539 215 aaPredicted RBP3.52□□□□□ -1.85
SS18-223ENST00000583595 PLCXD2Q0VAA5 305 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 POU2AF1Q16633 256 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 FOXI2Q6ZQN5 318 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 TRAPPC6BQ86SZ2 158 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 BAGE3Q86Y29 109 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 BAGE2Q86Y30 109 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 OR10G9Q8NGN4 311 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 MBD3L1Q8WWY6 194 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 SMIM10Q96HG1 83 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 PDCD1LG2Q9BQ51 273 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 WFDC6Q9BQY6 131 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 RSPO3Q9BXY4 272 aaPredicted RBP3.52□□□□□ -1.85
SS18-223ENST00000583595 SH3BGRL3Q9H299 93 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 WDR54Q9H977 334 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 ST20Q9HBF5 79 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 NPVFQ9HCQ7 196 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 FAM206AQ9NX38 181 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 ZNF391Q9UJN7 358 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 ANAPC10Q9UM13 185 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 HHLA2Q9UM44 414 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 ZNF780BQ9Y6R6 833 aa3.52□□□□□ -1.85
SS18-223ENST00000583595 SCN8AQ9UQD0 1980 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 IGKV6D-21A0A0A0MT36 114 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 IGKV6-21A0A0C4DH24 114 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 TMEM213A2RRL7 107 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CPSF4LA6NMK7 179 aaKnown RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 LINC01619G3V211 115 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 TMEM250H0YL14 139 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 PEX7O00628 323 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 PLPP3O14495 311 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CNIH1O95406 144 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 EPPINO95925 133 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 IGLV3-25P01717 112 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 LINC00869P0C866 280 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 IL9P15248 144 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 IL3RAP26951 378 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 OPRM1P35372 400 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CCR2P41597 374 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 REG1BP48304 166 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 LHX2P50458 406 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZNF83P51522 516 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CCL23P55773 120 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms